Job Description P75757 Confidence 16.00% Date Thu Jan 5 12:13:49 GMT 2012 Rank 21 Aligned Residues 93 % Identity 4% Template c2ksaA_ PDB info PDB header:neuropeptide receptor/neuropeptide Chain: A: PDB Molecule:substance-p receptor; PDBTitle: substance p in dmpc/chaps isotropic q=0.25 bicelles as a ligand for2 nk1r Resolution UNK

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	M	A	I	A	V	A	G	L	L	A	N	I	L	S	F	W	L	L	H	H	G	S	E	E	K	N	L	N	V	R	A	A	A	L	H	V	L	G	D	L	L	G	S	V	G	A	I	I	A	A	L	I	I	I	W	T	G	W	T	P	A	D	P	I	L	S	I	L	V	S	L	L	V	L	R	S	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	T	V	I	V	V	T	S	V	V	G	N	V	V	V	M	W	I	I	L	A	H	K	R	M	R	T	V	T	N	Y	F	L	V	N	L	A	F	A	E	A	S	M	A	A	F	N	T	V	V	N	F	T	Y	A	V	H	N	E	W	Y	Y	G	L	F	Y	C	K	F	H	N	F	F	P	I	A	A	V	F
Template Known Secondary structure																									T	T																						T												T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	K	D	S	V	N	E	L	L	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	I	Y	S	M	T	A	V	A	F	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions