 |
Job Description | P75757 | Confidence | 5.79% | Date | Thu Jan 5 12:13:49 GMT 2012 |
Rank | 81 | Aligned Residues | 73 |
% Identity | 16% | Template | c2e7xA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:150aa long hypothetical transcriptional regulator; |
PDBTitle: structure of the lrp/asnc like transcriptional regulator from2 sulfolobus tokodaii 7 complexed with its cognate ligand
|
Resolution | 1.80 Å |
|
 |
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | S | L | D | I | A | E | L | K | R | R | M | C | R | E | I | P | E | V | R | N | V | H | H | V | H | V | W | M | V | G | E | . |
K | P | V | M | T | L | H | V | Q | V | I | P | P | H | D | H | D | A | L | L | D | Q | I | Q | H | Y | L | M | D | H | Y | Q | I | E | H | A | T | I | Q | M | E | Y | Q | P | C | H |
Query Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|   | . |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   | . |
|   |   |   |
|   |
|   |   |   |   |   |   | . | . | . | . |
|
|   |   |
|
|   |   |   |
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |
|   |
|
|
|   |   |   |
|
Template Sequence |   |
Y | G | K | N | Y | H | V | E | L | G | N | K | . |
L | A | Q | I | P | G | V | W | G | V | Y | F | V | . |
. |
. |
. |
L | G | D | N | D | F | I | V | M | A | R | Y | . |
. |
. |
. |
. |
K | T | R | E | E | F | M | E | K | F | L | E | R | V | M | S | I | P | E | V | E | R | T | S | T | Q | V | V | V | K | I | I | K |
Template Known Secondary structure |   |
|
| T | T |  |  |  |  |  |  |  |  | . |  |  | T | S | T | T |  |  |  |  |  |  |
| . | . | . | . | S | S | S |
| S |  |  |  |  |  |  |  | . | . | . | . | . | S | S |  |  |  |  |  |  |  | T |  |  |  |  | T | T |
| T | T |  |  |  |  |  |  |  |  |
| S |
|
| S |
|
Template Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
  |   |
296 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
G | P | D | C |
Query Conservation |   |
  |   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |   |   |
Template Sequence |   |
E | S | P | N |
Template Known Secondary structure |   |
|
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|
Template SS confidence |   |
|
|
|
|
  |   |
143 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|