Job Description P21645 Confidence 99.97% Date Thu Jan 5 11:38:31 GMT 2012 Rank 12 Aligned Residues 192 % Identity 20% Template d1g97a1 SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes GlmU C-terminal domain-like Resolution 1.96

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		98	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		Q	N	I	A	P	.	S	A	V	I	D	A	T	A	K	L	G	N	N	V	S	I	G	A	N	A	V	I	E	S	G	V	E	L	G	D	N	V	I	I	G	A	G	C	F	V	G	K	N	S	K	I	G	A	G	S	R	L	W	A	N	V	T	I	Y	H	E	I	Q	I	G	Q	N	C	L	I	Q	S	G	T
Query Conservation							.
Alig confidence							.																																										.																		.	.
Template Conservation																																																	.																		.	.
Template Sequence		S	F	V	N	P	E	A	T	Y	I	D	I	D	V	E	I	A	S	E	V	Q	I	E	A	N	V	T	L	K	G	Q	T	K	I	G	A	E	T	V	L	T	N	G	T	Y	V	V	.	D	S	T	I	G	A	G	A	V	I	T	N	S	M	I	E	E	.	.	S	S	V	A	D	G	V	I	V	G	P	Y	A
Template Known Secondary structure				S		G	G	G					T	T					T	T					T	T					S	S					T	T					T	T					.	S					T	T					S					S	.	.					T	T					S	S
Template Predicted Secondary structure																																																	.																		.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	A	D	G	F	G	Y	A	N	D	R	G	N	W	V	K	I	P	Q	I	G	R	V	I	I	G	D	R	V	E	I	G	A	C	T	T	I	D	R	G	A	L	D	D	T	I	I	G	N	G	V	I	I	D	N	Q	C	Q	I	A	H	N	V	V	I	G	D	N	T	A	V	A	G	G	V	I	M	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	I	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	S	L	G	A	Q	V	H	I	G	N	F	V	E	V	K	G	S	S	I	G	E	N	T	K	A	G	H	L	T	Y	I	G	N	C	E	V	G	S	N	V	N	F	G	A	G	T	I	T	V	N	Y	D	G	K	N
Template Known Secondary structure					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					T	T											S					T	T											S					S	S					T	T						B	S	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.																				.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		257	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	S	.	L	K	I	G	R	Y	C	M	I	G	G	A	S	V	I	N	G	H	M	E	I	C	D	K	V	T	V	T	G	M	G	M	V	M	R	P	I	T	E	P	G	V	Y	S	S	G	I	P	L	Q	P	N	K	V
Query Conservation				.
Alig confidence				.																																								.
Template Conservation																																												.
Template Sequence		K	Y	K	T	V	I	G	N	N	V	F	V	G	S	N	S	T	I	I	A	P	V	E	L	G	D	N	S	L	V	G	A	G	S	T	I	T	K	D	V	P	A	.	D	A	I	A	I	G	R	G	R	Q	I	N	K	D
Template Known Secondary structure		B							T	T					T	T					S	S					T	T					T	T					S		B		T	.	T
Template Predicted Secondary structure																																												.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions