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Job DescriptionP21645
Confidence99.93%DateThu Jan 5 11:38:31 GMT 2012
Rank24Aligned Residues171
% Identity19%Templatec3r3rA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ferripyochelin binding protein; PDBTitle: structure of the yrda ferripyochelin binding protein from salmonella2 enterica
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.. .......170.........180.........190....
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Query Sequence  IGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYH. . . EIQIGQNCLIQSGTVVGADGFGYANDRGNWVK
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Template Sequence  LRPYK. . NLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPH. . . . .
Template Known Secondary structure 
BT..TB


TT

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TT

TT

TT

B

BTTBTT.....
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   195....200.........210.........220.........230.........240.........250.........260.........270....
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Query Sequence  IPQIGRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVIN
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Template Sequence  . . . GNPLIIGEDVTVGHKVMLH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GCTIGNRVLVGMGSIVL
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B

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TT
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   78.80.........90...... ...100.........110...
 
   275....280.........290... ......300.........310... ......320.........330.........340
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Query Sequence  GHMEICDKVTVTGMGMVMR. . PITEPGVYSSGIPLQPNKVW. RKTAALVMNIDDMSKRLKSLERKVNQQ
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Template Sequence  DGAIIEDDVMIGAGSLVPQHKRLES. GYLYLGSPVKQIRPLSDAERSGLQYSANNYVKWKDDYLSQDNH
Template Known Secondary structure  TT

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TT

T.TTTTT

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   114.....120.........130........ .140.........150.........160.........170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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