Job Description P21645 Confidence 99.96% Date Thu Jan 5 11:38:31 GMT 2012 Rank 17 Aligned Residues 192 % Identity 18% Template c3jqyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:polysialic acid o-acetyltransferase; PDBTitle: crystal strucutre of the polysia specific acetyltransferase neuo Resolution 1.70 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																			.	.	.	.																						.	.
Query SS confidence																		.	.	.	.	.																			.	.	.	.																						.	.
Query Sequence		T	A	K	L	G	N	N	V	S	I	G	A	N	A	V	I	.	.	.	.	.	E	S	G	V	E	L	G	D	N	V	I	I	G	A	G	C	F	V	.	.	.	.	G	K	N	S	K	I	G	A	G	S	R	L	W	A	N	V	T	I	Y	H	E	.	.	I	Q	I	G	Q	N	C	L	I	Q	S	G	T	V
Query Conservation																		.	.	.	.	.																			.	.	.	.																						.	.
Alig confidence																		.	.	.	.	.																			.	.	.	.																						.	.
Template Conservation
Template Sequence		N	V	F	V	C	G	D	L	V	N	S	K	E	N	K	V	Q	F	N	G	N	N	N	K	L	I	I	E	D	D	V	E	C	R	W	L	T	V	I	F	R	G	D	N	N	Y	V	R	I	H	K	N	S	K	I	K	G	D	I	V	A	T	K	G	S	K	V	I	I	G	R	R	T	T	I	G	A	G	F	E
Template Known Secondary structure										S	S		B	S							S	S	S							T	T												S	S	S							T	T											S	S							T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	D	G	F	G	Y	A	N	D	R	G	N	W	V	K	I	P	Q	I	G	R	V	I	I	G	D	R	V	E	I	G	A	C	T	T	I	D	R	G	A	L	D	D	T	I	I	G	N	G	V	I	I	D	N	Q	C	Q	I	A	H	N	V	V	I	G	D	N	T	A	V	A	G	G	V	I	M	A	G
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	C	N	V	T	I	G	H	D	C	M	I	A	R	D	V	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	S	D	G	H	P	I	F	D	I	H	S	K	K	R	I	N	W	A	K
Template Known Secondary structure					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						T	T					S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		S	S			B		T	T	T			B
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.																	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		S	L	K	I	G	R	Y	C	M	I	G	G	A	S	V	I	N	G	H	M	E	I	C	D	K	V	T	V	T	G	M	G	M	V	M	R	P	I	T	E	P	G	V	Y	S	S	G	I	P	L	Q	P	N	K	V	.	.	.	W	R	K	T	A	A	L	V	M	N	I	D	D	M	S	K	R	L	K	S	L	E
Query Conservation																																																									.	.	.
Alig confidence																																										.															.	.	.											.	.
Template Conservation																																										.																												.	.
Template Sequence		D	I	I	I	S	S	Y	V	W	V	G	R	N	V	S	I	M	K	G	V	S	V	G	S	G	S	V	I	G	Y	G	S	I	V	T	K	D	V	P	S	.	M	C	A	A	A	G	N	P	A	K	I	I	K	R	N	I	I	W	A	R	T	D	K	A	E	L	I	.	.	S	D	D	K	R	C	S	S	Y	H
Template Known Secondary structure							S	S					S	S					T	T					T	T					T	T					S		B		T	.	T						T	T							S					S		T	T			S	G	.	.	G	G
Template Predicted Secondary structure																																										.																												.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.
		335	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	V	N	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	L	T	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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