Job Description P21645 Confidence 99.97% Date Thu Jan 5 11:38:31 GMT 2012 Rank 13 Aligned Residues 277 % Identity 16% Template c3eg4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n- PDBTitle: crystal structure of 2,3,4,5-tetrahydropyridine-2-2 carboxylate n-succinyltransferase from brucella melitensis3 biovar abortus 2308 Resolution 1.87 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	L	A	Q	Q	L	D	A	E	L	H	G	D	G	D	I	V	I	T	G	V	A	S	M	Q	S	A	Q	T	G	H	I	T	F	M	V	N	P	K	Y	R	E	H	L	G	L	C	Q	A	S	A	V	V	M	T	Q	D	D	L	P	F	A	K	S	A	A	L	V	V	K	N	P	Y	L	T	Y	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	S	L	E	K	T	I	E	K	A	F	D	E	R	D	G	I	N	T	A	T	R	G	E	V	R	E	A	V	E	Q	S	L	I	L	L	D	R	G	E	V	R	V	A	E	K	Q	A	D	G	N	W	H	V	N	Q	W	L	K	K	A	V	L	L	S	F	R	L	N	P	M	E	V	I	K	G	G	P	G
Template Known Secondary structure															T	G	G	G			T	T																		T	T	S	S		S					T	T	S																			S								S	G	G
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Q	I	L	D	T	T	P	Q	P	A	Q	N	I	A	P	S	A	V	I	D	A	T	A	K	L	G	N	N	V	S	I	G	A	N	A	V	I	E	S	G	V	E	L	G	D	N	V	I	I	G	A	G	C	F	V	G	K	N	S	K	I	G	A	G	S	R	L	W	A	N	V	T	I	Y	H	E	I	Q
Query Conservation
Alig confidence																									.	.	.	.	.	.																									.
Template Conservation																									.	.	.	.	.	.																									.
Template Sequence		Q	S	S	W	W	D	K	V	P	S	K	F	D	G	W	T	A	N	E	F	E	K	A	.	.	.	.	.	.	G	F	R	A	V	P	N	C	I	V	R	H	S	A	Y	I	A	P	N	A	I	L	M	P	.	S	F	V	N	L	G	A	Y	V	D	K	G	A	M	I	D	T	W	A	T	V	G	S	C	A	Q
Template Known Secondary structure		G						S			B	T	T	T	T										.	.	.	.	.	.						T	T				B	T	T					T	T					S	.					T	T					T	T					T	T					T	T
Template Predicted Secondary structure																									.	.	.	.	.	.																									.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	Q	N	C	L	I	Q	S	G	T	V	V	G	A	D	G	F	G	Y	A	N	D	R	G	N	W	V	K	I	P	Q	I	G	R	V	I	I	G	D	R	V	E	I	G	A	C	T	T	I	D	R	G	A	L	D	D	T	I	I	G	N	G	V	I	I	D	N	Q	C	Q	I	A	H	N	V	V	I	G	D
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	E	P	.	.	.	.	.	.	.	.	.	.	.	M	Q	A	G	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	G	C	I	V	R	E
Template Known Secondary structure				T	T					T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T					T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.												.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																							.	.	200	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		N	T	A	V	A	G	G	V	I	M	A	G	S	L	K	I	G	R	Y	C	M	I	G	G	A	S	V	I	N	G	H	M	E	I	C	D	K	V	T	V	T	G	M	G	M	V	M	R	P	I	T	E	P	G	V	Y	S	S	G	I	P	L	Q	P	N	K	V	W	R	K	T	A	A	L	V	M	N	.	I	D
Query Conservation																																																																															.
Alig confidence																						.	.	.	.	.																												.																									.
Template Conservation																						.	.	.	.	.																												.
Template Sequence		G	S	V	L	G	M	G	V	F	I	G	K	S	T	K	I	V	D	R	A	.	.	.	.	.	T	G	E	V	F	Y	G	E	V	P	P	Y	S	V	V	V	A	G	T	M	P	G	K	N	V	P	G	.	E	N	W	G	P	S	L	Y	C	A	V	I	V	K	R	A	D	E	K	T	R	S	K	T	S	I	N
Template Known Secondary structure		T					T	T					T	T						T	T	.	.	.	.	.	T						S				T	T														T	T	.	S	S																						S
Template Predicted Secondary structure																						.	.	.	.	.																												.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		325	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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