Job Description P21645 Confidence 100.00% Date Thu Jan 5 11:38:31 GMT 2012 Rank 3 Aligned Residues 339 % Identity 33% Template c2iu9C_ PDB info PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine PDBTitle: chlamydia trachomatis lpxd with 100mm udpglcnac (complex ii) Resolution 3.1 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		P	S	I	R	L	A	D	L	A	Q	Q	L	D	A	E	L	H	G	D	G	D	I	V	I	T	G	V	A	S	M	Q	S	A	Q	T	G	H	I	T	F	M	V	N	P	K	Y	R	E	H	L	G	L	C	Q	A	S	A	V	V	M	T	Q	D	D	.	.	.	.	L	P	F	A	K	S	A	A	L	V	V	K
Query Conservation																																																																		.	.	.	.
Alig confidence																																																																		.	.	.	.
Template Conservation
Template Sequence		S	T	Y	S	L	E	Q	L	A	D	F	L	K	V	E	F	Q	G	N	G	A	T	L	L	S	G	V	E	E	I	E	E	A	K	T	A	H	I	T	F	L	D	N	E	K	Y	A	K	H	L	K	S	S	E	A	G	A	I	I	I	S	R	T	Q	F	Q	K	Y	R	D	L	N	K	N	F	L	I	T	S	E
Template Known Secondary structure														T					S		T	T									T	T	T			T	T								S	T	T	G	G	G	T	S	S				S													T	T	S	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		N	P	Y	L	T	Y	A	R	M	A	Q	I	L	D	.	T	T	P	Q	P	A	Q	N	I	A	P	S	A	V	I	D	A	T	A	K	L	G	N	N	V	S	I	G	A	N	A	V	I	E	S	G	V	E	L	G	D	N	V	I	I	G	A	G	C	F	V	G	K	N	S	K	I	G	A	G	S	R	L	W	A
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		S	P	S	L	V	F	Q	K	C	L	E	L	F	I	T	P	V	D	S	G	F	P	G	I	H	P	T	A	V	I	H	P	T	A	I	I	E	D	H	V	C	I	E	P	Y	A	V	V	C	Q	H	A	H	V	G	S	A	C	H	I	G	S	G	S	V	I	G	A	Y	S	T	V	G	E	H	S	Y	I	H	P
Template Known Secondary structure												T	T	T							S			S	B		T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		N	V	T	I	Y	H	E	I	Q	I	G	Q	N	C	L	I	Q	S	G	T	V	V	G	A	D	G	F	G	Y	A	N	D	R	.	G	N	W	V	K	I	P	Q	I	G	R	V	I	I	G	D	R	V	E	I	G	A	C	T	T	I	D	R	G	A	L	D	D	T	I	I	G	N	G	V	I	I	D	N	Q	C
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		R	V	V	I	R	E	R	V	S	I	G	K	R	V	I	I	Q	P	G	A	V	I	G	S	C	G	F	G	Y	V	T	S	A	F	G	Q	H	K	H	L	K	H	L	G	K	V	I	I	E	D	D	V	E	I	G	A	N	T	T	I	D	R	G	R	F	K	H	S	V	V	R	E	G	S	K	I	D	N	L	V
Template Known Secondary structure		S					S	S					T	T					T	T								S						S	S	S															T	T					T	T							S	S	S						T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	H	N	V	V	I	G	D	N	T	A	V	A	G	G	V	I	M	A	G	S	L	K	I	G	R	Y	C	M	I	G	G	A	S	V	I	N	G	H	M	E	I	C	D	K	V	T	V	T	G	M	G	M	V	M	R	P	I	T	E	P	G	V	Y	S	S	G	I	P	L	Q	P	N	K	V	W	R	K
Query Conservation
Alig confidence																																																																.
Template Conservation																																																																.
Template Sequence		Q	I	A	H	Q	V	E	V	G	Q	H	S	M	I	V	A	Q	A	G	I	A	G	S	T	K	I	G	N	H	V	I	I	G	G	Q	A	G	I	T	G	H	I	C	I	A	D	H	V	I	M	M	A	Q	T	G	V	T	K	S	I	T	S	.	P	G	I	Y	G	G	A	P	A	R	P	Y	Q	E	I	H	R
Template Known Secondary structure					T	T					T	T					T	T					T	T					T	T					T	T					S	S					T	T					T	T					S		B		S	.						T	T	T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	A	L	V	M	N	I	D	D	M	S	K	R	L	K	S	L	E	R	K	V	N	Q	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	A	K	V	R	N	L	P	R	L	E	E	R	I	A	A	L	E	K	L	V	Q	K	L	E
Template Known Secondary structure							T	T												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions