Job Description P21645 Confidence 99.41% Date Thu Jan 5 11:38:31 GMT 2012 Rank 51 Aligned Residues 171 % Identity 16% Template c1yp3C_ PDB info PDB header:transferase Chain: C: PDB Molecule:glucose-1-phosphate adenylyltransferase small PDBTitle: crystal structure of potato tuber adp-glucose2 pyrophosphorylase in complex with atp Resolution 2.60 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	N	P	Y	L	T	Y	A	R	M	A	Q	I	L	D	T	T	P	Q	P	A	Q	N	I	A	P	S	A	V	I	D	A	T	A	K	L	G	N	N	V	S	I	G	A	N	A	V	I	E	S	G	V	E	L	G	D	N	V	I	I	G	A	G	C	F	V	G	K	N	S	K	I	G	A	G	S	R	L	W
Query Conservation
Alig confidence																																																			.	.																.	.
Template Conservation																																																			.	.																.	.
Template Sequence		I	G	T	I	E	A	F	Y	N	A	N	L	G	I	T	K	K	P	V	P	D	F	S	F	Y	D	R	S	A	P	I	Y	T	Q	P	R	Y	L	P	P	S	K	M	L	D	A	D	V	T	.	.	D	S	V	I	G	E	G	C	V	I	K	N	C	K	I	.	.	H	H	S	V	V	G	L	R	S	C	I	S
Template Known Secondary structure			S	S										G	G	G		S	S			S	S		S			S	S	S																					.	.	S					T	T									.	.		S					T	T
Template Predicted Secondary structure																																																			.	.																.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	V	T	I	Y	H	E	I	Q	I	G	Q	N	C	L	I	Q	S	G	T	V	V	G	A	D	G	F	G	Y	A	N	D	R	G	N	W	V	K	I	P	Q	I	G	R	V	I	I	G	D	R	V	E	I	G	A	C	T	T	I	D	R	G	A	L	D	D	T	I	I	G	N	G	V	I	I	D	N	Q	C
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	A	I	I	E	D	S	L	L	M	G	A	D	Y	Y	E	T	D	A	D	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	A	K	G	S	V	P	I	G	I	G	K	N	C	H	I	K	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T					S							S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T				S	B	B		T	T					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.																				380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	H	N	V	V	I	G	D	N	T	A	V	A	G	G	V	I	M	A	G	S	L	K	I	G	R	Y	C	M	I	G	G	A	S	V	I	N	G	H	M	E	I	C	D	K	V	T	V	T	G	M	G	M	V
Query Conservation
Alig confidence																																								.	.	.	.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		I	I	D	K	N	A	R	I	G	D	N	V	K	I	I	N	K	D	N	V	Q	E	A	A	R	E	T	D	G	Y	F	I	K	S	G	I	V	T	.	.	.	.	.	V	I	K	D	A	L	I	P	S	G	I	I	I
Template Known Secondary structure					T	T					T	T						T	T								G	G	G	T					T	T				.	.	.	.	.			T	T					T	T		B
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.						.	440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions