Job Description P76398 Confidence 100.00% Date Thu Jan 5 12:22:39 GMT 2012 Rank 1 Aligned Residues 995 % Identity 22% Template c3k07A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa Resolution 3.52 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	R	L	F	I	M	R	P	V	A	T	T	L	L	M	V	A	I	L	L	A	G	I	I	G	Y	R	A	L	P	V	S	A	L	P	E	V	D	Y	P	T	I	Q	V	V	T	L	Y	P	G	A	S	P	D	V	M	T	S	A	V	T	A	P	L	E	R	Q	F	G	Q	M	S	G	L	K	Q	M	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	R	R	S	V	A	N	R	F	L	V	L	M	G	A	L	F	L	S	I	W	G	T	W	T	I	I	N	T	P	V	D	A	L	P	D	L	S	D	V	Q	V	I	I	K	T	S	Y	P	G	Q	A	P	Q	I	V	E	N	Q	V	T	Y	P	L	T	T	T	M	L	S	V	P	G	A	K	T	V	R	G
Template Known Secondary structure									T																						S				S	S															S	S										T							T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	S	G	G	A	S	V	I	T	L	Q	F	Q	L	T	L	P	L	D	V	A	E	Q	E	V	Q	A	A	I	N	A	A	T	N	L	L	P	S	D	L	P	N	P	P	V	Y	S	K	V	N	P	A	D	P	P	I	M	T	L	A	V	T	S	T	A	M	P	M	T	Q	V	E	D	M	V	E	T	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	Q	F	G	D	S	Y	V	Y	V	I	F	E	D	G	T	D	P	Y	W	A	R	S	R	V	L	E	Y	L	N	Q	V	Q	G	K	L	P	A	G	V	S	A	E	L	G	P	D	A	T	G	V	G	W	I	Y	E	Y	A	L	V	D	R	S	G	K	H	D	L	A	D	L	R	S	L	Q	D	W	F	L
Template Known Secondary structure					S	S										S	S			T	T															T	T	S		S	S								S			G	G	G										T	T	S		S												T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	K	I	S	Q	I	S	G	V	G	L	V	T	L	S	G	G	Q	R	P	A	V	R	V	K	L	N	A	Q	A	I	A	A	L	G	L	T	S	E	T	V	R	T	A	I	T	G	A	N	V	N	S	A	K	G	S	L	D	G	P	S	R	A	V	T	L	S	A	N	D	Q	M	Q	S	A	E	E	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	E	L	K	T	I	P	D	V	A	E	V	A	S	V	G	G	V	V	K	E	Y	Q	V	V	I	D	P	Q	R	L	A	Q	Y	G	I	S	L	A	E	V	K	S	A	L	D	A	S	N	Q	E	A	G	G	S	S	I	E	L	A	E	A	E	Y	M	V	R	A	S	G	Y	L	Q	T	L	D	D	F	N
Template Known Secondary structure						T	T	S	T	T									S																	T	T												T	S	S											T	T													S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		252	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																					.
Query SS confidence									.																																					.
Query Sequence		Q	L	I	I	A	Y	Q	.	N	G	A	P	I	R	L	G	D	V	A	T	V	E	Q	G	A	E	N	S	W	L	G	A	W	A	N	K	E	Q	A	I	V	M	N	V	.	Q	R	Q	P	G	A	N	I	I	S	T	A	D	S	I	R	Q	M	L	P	Q	L	T	E	S	L	P	K	S	V	K	V	T	V	L
Query Conservation									.																																					.
Alig confidence									.																																					.
Template Conservation
Template Sequence		H	I	V	L	K	A	S	E	N	G	V	P	V	Y	L	R	D	V	A	K	V	Q	I	G	P	E	M	R	R	G	I	A	E	L	N	G	E	G	E	V	A	G	G	V	V	I	L	R	S	G	K	N	A	R	E	V	I	A	A	V	K	D	K	L	E	T	L	K	S	S	L	P	E	G	V	E	I	V	T	T
Template Known Secondary structure		T							T	T	S					G	G	G	T											S						T	T	T												T	T	S																	G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	R	T	T	N	I	R	A	S	V	D	D	T	Q	F	E	L	M	M	A	I	A	L	V	V	M	I	I	Y	L	F	L	R	N	I	P	A	T	I	I	P	G	V	A	V	P	L	S	L	I	G	T	F	A	V	M	V	F	L	D	F	S	I	N	N	L	T	L	M	A	L	T	I	A	T	G	F	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	R	S	Q	L	I	D	R	A	I	D	N	L	S	G	K	L	L	E	E	F	I	V	V	A	V	V	C	A	L	F	L	W	H	V	R	S	A	L	V	A	I	I	S	L	P	L	G	L	C	I	A	F	I	V	M	H	F	Q	G	L	N	A	N	I	M	S	L	G	G	I	A	I	A	V	G	A	M	V
Template Known Secondary structure				T																																									T																	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.												.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	A	I	V	V	I	E	N	I	S	R	Y	I	E	K	.	.	.	.	.	.	.	.	.	.	.	G	E	K	P	L	A	A	A	L	K	G	A	G	E	I	G	F	T	I	I	S	L	T	F	S	L	I	A	V	L	I	P	L	L	F	M	G	D	I	V	G	R	L	F	R	E	F	A	I	T	L	A	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	A	I	V	M	I	E	N	A	H	K	R	L	E	E	W	Q	H	Q	H	P	D	A	T	L	D	N	K	T	R	W	Q	V	I	T	D	A	S	V	E	V	G	P	A	L	F	I	S	L	L	I	I	T	L	S	F	I	P	I	F	T	L	E	G	Q	E	G	R	L	F	G	P	L	A	F	T	K	T	Y
Template Known Secondary structure																						S		S	S																		S																G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L	I	S	A	V	V	S	L	T	L	T	P	M	M	C	A	R	M	L	S	Q	E	S	L	R	K	Q	N	R	F	S	R	A	S	E	K	M	F	D	R	I	I	A	A	Y	G	R	G	L	A	K	V	L	N	H	P	W	L	T	L	S	V	A	L	S	T	L	L	L	S	V	L	L	W	V	F	I	P
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	M	A	G	A	A	L	L	A	I	V	V	I	P	I	L	M	G	Y	W	P	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	L	I	R	V	Y	H	P	L	L	L	K	V	L	H	W	P	K	T	T	L	L	V	A	A	L	S	V	L	T	V	L	W	P	L	N	K	V	G
Template Known Secondary structure													T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															T	T					T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.																		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610						.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		K	G	F	F	P	V	Q	D	N	G	I	I	Q	G	T	L	Q	A	P	Q	S	S	S	F	A	N	M	A	Q	R	Q	R	Q	V	A	D	V	I	L	Q	D	P	A	V	Q	S	L	T	S	F	V	G	.	.	.	.	.	V	D	G	T	N	P	S	L	N	S	A	R	L	Q	I	N	L	K	P	L	D	E	R
Query Conservation																																																						.	.	.	.	.
Alig confidence																																																						.	.	.	.	.
Template Conservation
Template Sequence		G	E	F	L	P	Q	I	N	E	G	D	L	L	Y	M	P	S	T	L	P	G	I	S	A	A	E	A	A	S	M	L	Q	K	T	D	K	L	I	M	S	V	P	E	V	A	R	V	F	G	K	T	G	K	A	E	T	A	T	D	S	A	P	L	E	M	V	E	T	T	I	Q	L	K	P	Q	E	Q	W	R	P
Template Known Secondary structure				S	S						S										S																			T	T	S	T	T												S	S	T	T					T	T											G	G	G	S		S
Template Predicted Secondary structure
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.		.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		D	D	R	V	Q	K	V	I	A	R	L	Q	T	A	V	D	K	V	P	G	V	D	L	F	L	Q	P	T	Q	.	D	L	T	I	D	T	Q	V	S	R	T	Q	Y	Q	F	T	L	Q	A	T	S	L	D	A	L	S	T	W	V	P	Q	L	M	E	K	L	Q	Q	L	P	Q	L	S	D	V	S	S	D	W	Q
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		G	M	T	M	D	K	I	I	E	E	L	D	N	T	V	R	L	P	G	L	A	N	L	W	V	P	P	I	R	N	R	I	D	M	L	S	T	G	I	K	S	P	I	G	I	K	V	S	G	T	V	L	A	D	I	D	A	M	A	E	Q	I	E	E	V	A	R	T	V	P	G	V	A	S	A	L	A	E	R	L
Template Known Secondary structure		S																	T	T																T	T	T	S		S	S	S								S	S	T	T														T	T	S	S	S		S							T
Template Predicted Secondary structure
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
		713	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	G	L	V	A	Y	V	N	V	D	R	D	S	A	S	R	L	G	I	S	M	A	D	V	D	N	A	L	Y	N	A	F	G	Q	R	L	I	S	T	I	Y	T	Q	A	N	Q	Y	R	V	V	L	E	H	N	T	E	N	T	P	G	L	A	A	L	D	T	I	R	L	T	S	S	D	G	G	V	V	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	G	R	Y	I	N	V	E	I	N	R	E	K	A	A	R	Y	G	M	T	V	A	D	V	Q	L	F	V	T	S	A	V	G	G	A	M	V	G	E	T	V	E	G	I	A	R	Y	P	I	N	L	R	Y	P	Q	S	W	R	D	S	P	Q	A	L	R	Q	L	P	I	L	T	P	M	K	Q	Q	I	T	L
Template Known Secondary structure		T	B																T	T												T	T	T	T										T	T											G	G	G	G	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.
		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	I	A	K	I	E	Q	R	F	A	P	L	S	I	N	H	L	D	Q	F	P	V	T	T	I	S	F	N	V	P	D	N	Y	S	L	G	D	A	V	Q	A	I	M	D	T	E	K	T	L	N	L	P	V	D	I	T	T	Q	F	Q	G	S	T	L	A	F	Q	S	A	L	G	S	T	V	W	L	I	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	V	A	D	I	K	V	S	T	G	P	S	M	L	K	T	E	N	A	R	P	T	S	W	I	Y	I	D	A	R	D	R	D	M	V	S	V	V	H	D	L	Q	K	A	I	A	E	K	V	Q	L	K	P	G	T	S	V	A	F	S	G	Q	F	E	L	L	E	R	A	N	H	K	L	K	L	M	V	P	M
Template Known Secondary structure														S						T	T											S	S	S																					T	T																					T
Template Predicted Secondary structure
Template SS confidence
		799	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.
		873	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		A	V	V	A	M	Y	I	V	L	G	I	L	Y	E	S	F	I	H	P	I	T	I	L	S	T	L	P	T	A	G	V	G	A	L	L	A	L	L	I	A	G	S	E	L	D	V	I	A	I	I	G	I	I	L	L	I	G	I	V	K	K	N	A	I	M	M	I	D	F	A	L	A	A	E	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	M	I	I	F	V	L	L	Y	L	A	F	R	R	V	G	E	A	L	L	I	I	S	S	V	P	F	A	L	V	G	G	I	W	L	L	W	W	M	G	F	H	L	S	V	A	T	G	T	G	F	I	A	L	A	G	V	A	A	E	F	G	V	V	M	L	M	Y	L	R	H	A	I	E	A	V	P	S	L
Template Known Secondary structure															S										T	T															T	T					T	T																														S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		879	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.
						947	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	R	E	Q	G	M	S	P	R	E	A	I	Y	Q	A	C	L	L	R	F	R	P	I	L	M	T	T	L	A	A	L	L	G	A	L	P	L	M	L	S	T	G	V	G	A	E	L	R	R	P	L	G	I	G	M	V	G	G	L	I	V	S	Q	V	L	T	L	F	T	T	P	V	I	Y	L	L	F
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		N	N	P	Q	T	F	S	E	Q	K	L	D	E	A	L	Y	H	G	A	V	L	R	V	R	P	K	A	M	T	V	A	V	I	I	A	G	L	L	P	I	L	W	G	T	G	A	G	S	E	V	M	S	R	I	A	A	P	M	I	G	G	M	I	T	A	P	L	L	S	L	F	I	I	P	A	A	Y	K	L	M
Template Known Secondary structure		G		S	S	S	S		S	T	T	T							T	T	T	T	T														T	T	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		959	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.
		1023
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1039