Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEZ1
Confidence74.83%DateThu Jan 5 11:24:40 GMT 2012
Rank49Aligned Residues206
% Identity15%Templated1vc4a_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20......... 30.........40.........50.........60.........70.........80........
Predicted Secondary structure 



...

























Query SS confidence 

















. . .


























































Query Sequence  LNQSLAEVQGQINVSFEF. . . FPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPH
Query Conservation      
    
   

 
 ... 


       
      
    
  



       
  
   
  
    
   
 
Alig confidence 





..









...





































..
















..
Template Conservation     

 ..     



 

 


 
 
   

   
      

 






   
 
..
   
  

  
 



..
Template Sequence  FKEALL. . RPGLSVIAEVKRQSPSEGLIREVDPVEAALAYARGGARAVSVLTEPHRFGG. . SLLDLKRVREAVDLPLL. .
Template Known Secondary structure  T..SSS

S

TTT



S

TT
S


SSS

..


S
..
Template Predicted Secondary structure  ..





























..




..
Template SS confidence 















































































   37..40.. .......50.........60.........70.........80.........90... ......100.........110
 
   8990.........100.........110.........120.........130.........140.........150.........160........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  LTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLN
Query Conservation 

 

 
   
   
      

 


 
 

 
         
 


  
     
 



  

 

       
   
Alig confidence  ..









..




















.......












.








............


Template Conservation  .. 





  
..
  
   


 



   
  ....... 
 

   
  

.
  



  ............  
Template Sequence  . . RKDFVVDPFM. . LEEARAFGASAALLIVALLGE. . . . . . . LTGAYLEEARRLG. LEALVEVHT. . . . . . . . . . . . ERE
Template Known Secondary structure  ..S


S..TT
SGG.......GT.

S............
Template Predicted Secondary structure  ..





..








.......

.



............
Template SS confidence 















































































   111........120 .........130.........140. ........150.... .....160... ...
 
   169170.........180 .........190.........200.........210.........220... ......230.........240.
Predicted Secondary structure 



......















.





Query SS confidence 











. . . . . .










































.

















Query Sequence  LKRKVDAGANRA. . . . . . ITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKF. ADMTNVRIPAWMAQMFDG
Query Conservation 
  
  


 
 ......


  

           
  

  


 

 
  
 
     .    

 

  
   
  
Alig confidence 











......




























.












.












....
Template Conservation     
   

  







 
   
      
   
        


.



 
 


  
  











.... 
Template Sequence  LEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVA. ESGYSRKEELKALEGLFDAVLIGTSLM. . . . R
Template Known Secondary structure  T
SSB
TTT

B
TTTT

S.S


STTTTT
S
....T
Template Predicted Secondary structure 

















.








....
Template SS confidence 















































































   167..170.........180.........190.........200.........210... ......220.........230.........240 .
 
   242.......250..
Predicted Secondary structure 



Query SS confidence 










Query Sequence  LDDDAETRKLV
Query Conservation       
     
Alig confidence 










Template Conservation 
 

      
Template Sequence  APDLEAALREL
Template Known Secondary structure  SS
Template Predicted Secondary structure 


Template SS confidence 










   242.......250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions