Job Description P0AEZ1 Confidence 58.52% Date Thu Jan 5 11:24:40 GMT 2012 Rank 74 Aligned Residues 201 % Identity 16% Template d1rbla1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		Q	S	L	A	E	V	Q	G	Q	I	N	V	S	F	E	F	F	P	P	R	T	S	E	M	E	Q	T	L	W	N	S	I	D	R	L	S	S	L	K	P	K	F	V	S	V	T	Y	G	A	N	S	G	E	R	.	.	.	.	.	.	.	.	D	R	T	H	S	I	I	K	G	I	K	D	R	T	G	L	E	A
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence														.																															.											.	.	.	.	.	.	.	.
Template Conservation														.																															.
Template Sequence		R	D	L	L	N	K	Y	G	R	P	M	L	.	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	.	K	D	D	E	N	I	N	S	Q	P	F	Q	R	W	R	D	R	F	L	F	V	A	D	A	I	H	K	S	Q	A	E	T	G	E	I	K
Template Known Secondary structure						T			S	S				.			B		S	S	S	S																	T	T		S			.				T	T		S	S	B	T	T	B																					S	S
Template Predicted Secondary structure														.																															.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																											.														.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.														.	.	.	.	.	.	.	.	.
Query Sequence		A	P	H	L	T	C	I	D	A	T	P	D	E	L	R	T	I	A	R	D	Y	W	N	N	G	I	R	H	I	V	A	L	R	G	D	L	P	P	G	S	G	K	P	E	M	Y	A	S	D	L	V	T	L	L	K	E	V	.	A	D	F	D	I	S	V	A	A	Y	P	E	V	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.														.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.		.	.	.	.	.	.	.																.														.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.		.	.	.	.	.	.	.
Template Sequence		G	H	Y	L	N	V	T	A	P	T	C	E	E	M	M	K	R	A	E	F	A	K	E	L	G	M	P	I	I	M	H	.	.	.	D	.	.	.	.	.	.	.	F	L	T	A	G	F	T	A	N	T	T	L	A	K	W	C	R	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N
Template Known Secondary structure										S	S														T	T		S					.	.	.		.	.	.	.	.	.	.																				T								T	T						S		S	S
Template Predicted Secondary structure																																	.	.	.		.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.								.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	E	A	K	S	A	Q	A	D	L	L	N	L	K	R	K	V	D	A	G	A	N	R	A	I	T	Q	F	F	.	.	.	.	.	F	D	V	E	S	Y	L	R	F	R	D	R	C	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	D	V	E	I	I	P	G	I	L	P	V
Query Conservation																																.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.												.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		H	G	I	H	F	R	V	L	A	K	C	L	R	L	.	.	.	.	.	S	G	G	D	H	L	H	S	G	T	V	V	G	K	L	E	G	D	K	A	S	T	L	G	F	V	D	L	M	R	E	D	H	I	E	A	D	R	S	R	G	V	F	F	T	Q	D	W	A	S	M	P	G	V	L	P	V	A	S	G	G
Template Known Secondary structure		S	S													.	.	.	.	.				S							S	S	S	S	S																	S					B	G	G	G	T	B		S					T	T										S	S
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320						.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	F	K	Q	A	K	K	F	A	D	M	T	N	V	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	H	V	W	H	M	P	A	L	V	E	I	F	G	D	D	S
Template Known Secondary structure				G	G	G										S	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions