Job Description P0AEZ1 Confidence 28.28% Date Thu Jan 5 11:24:40 GMT 2012 Rank 149 Aligned Residues 199 % Identity 13% Template d1bwva1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70									.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.
Query Sequence		Q	S	L	A	E	V	Q	G	Q	I	N	V	S	F	E	F	F	P	P	R	T	S	E	M	E	Q	T	L	W	N	S	I	D	R	L	S	S	L	K	P	K	F	V	S	V	T	Y	G	A	N	S	G	E	R	D	R	T	.	.	.	.	.	.	.	.	H	S	I	I	K	G	I	K	D	R	T	G	L	E	A
Query Conservation																																																											.	.	.	.	.	.	.	.
Alig confidence														.																															.	.													.	.	.	.	.	.	.	.
Template Conservation														.																															.	.
Template Sequence		R	E	R	L	D	K	F	G	R	P	L	L	.	G	C	T	T	K	P	K	L	G	L	S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	.	.	D	D	E	N	I	N	S	Q	P	F	M	R	W	R	E	R	Y	L	F	T	M	E	A	V	N	K	A	S	A	A	T	G	E	V	K
Template Known Secondary structure						T			S	S				.					S	S	S	S																		T		S	B		.	.			T	T		S	S	B	T	T	B																					T	S
Template Predicted Secondary structure														.																															.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.
Predicted Secondary structure																																																												.															.	.	.
Query SS confidence																																																												.															.	.	.
Query Sequence		A	P	H	L	T	C	I	D	A	T	P	D	E	L	R	T	I	A	R	D	Y	W	N	N	G	I	R	H	I	V	A	L	R	G	D	L	P	P	G	S	G	K	P	E	M	Y	A	S	D	L	V	T	L	L	K	E	V	A	.	D	F	D	I	S	V	A	A	Y	P	E	V	H	P	.	.	.	E	A	K	S
Query Conservation																																																												.															.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.																	.															.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N	F	A	K	E	L	G	S	V	I	I	M	I	.	.	.	.	.	.	.	.	.	.	.	D	L	V	I	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q	K	N
Template Known Secondary structure		B								S	S														T	T		S					.	.	.	.	.	.	.	.	.	.	.		G	G	G															T	T								T	T	T					S		T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.												.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
								162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	Q	A	D	L	L	N	L	K	R	K	V	D	A	G	A	N	R	A	I	T	Q	F	F	.	.	.	.	.	F	D	V	E	S	Y	L	R	F	R	D	R	C	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	D	V	E	I	I	P	G	I	L	P	V
Query Conservation		.	.	.	.	.	.																									.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.									.	.	.	.	.												.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		H	G	M	N	F	R	V	I	C	K	W	M	R	M	.	.	.	.	.	A	G	V	D	H	I	H	A	G	T	V	V	G	K	L	E	G	D	P	I	I	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W	A	S	L	R	K	V	M	P	V	A	S	G	G
Template Known Secondary structure		S	S													.	.	.	.	.		T		S							S	S	S	S	S																	S					B	T	T	T	T	B		S					T	T										S	S
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320						.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	F	K	Q	A	K	K	F	A	D	M	T	N	V	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	H	A	G	Q	M	H	Q	L	I	H	Y	L	G	E	D	V
Template Known Secondary structure				T	T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions