Job Description P0AEZ1 Confidence 74.15% Date Thu Jan 5 11:24:40 GMT 2012 Rank 50 Aligned Residues 230 % Identity 14% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		F	H	A	S	Q	R	D	A	L	N	Q	S	L	A	E	V	Q	G	Q	I	N	V	S	F	E	F	F	P	P	R	T	S	E	M	E	Q	T	L	W	N	S	I	D	R	L	S	S	L	K	P	K	F	V	S	V	T	Y	G	A	N	S	G	E	R	D	.	R	T	H	S	I	I	K	G	I	K	D	R	T	G
Query Conservation																																																																			.
Alig confidence																	.	.	.	.	.									.	.																																				.
Template Conservation																	.	.	.	.	.									.	.
Template Sequence		N	F	R	E	T	V	E	I	M	V	E	E	G	V	D	.	.	.	.	.	G	I	I	F	E	T	F	S	.	.	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D	E	L	D
Template Known Secondary structure														T		S	.	.	.	.	.									.	.																	S	S	S										T	T	S			T	T	S												T	S	S
Template Predicted Secondary structure																	.	.	.	.	.									.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		L	E	A	A	P	H	L	T	C	I	D	A	T	P	D	E	L	R	T	I	A	R	D	Y	W	N	N	G	I	R	H	I	V	A	L	R	G	D	L	P	P	G	S	G	K	P	E	M	Y	A	S	D	L	V	T	L	L	K	E	V	A	D	F	D	I	S	V	.	.	.	A	A	Y	P	E	V	H	P	E	A
Query Conservation																																																																					.	.	.
Alig confidence		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.						.	.	.	.	.
Template Conservation		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Sequence		.	I	D	A	L	G	I	N	C	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	G	Y	P	L	.	.	.	.	.
Template Known Secondary structure		.		S						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T	T			S													.	.	.	.	.
Template Predicted Secondary structure		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
			200	.	.	.	.	.	.	.	.																																			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		K	S	A	Q	A	D	L	L	N	L	K	R	K	V	D	A	G	A	N	R	A	I	T	Q	F	F	F	D	V	E	S	Y	L	R	F	R	D	R	C	V	S	A	G	I	D	V	E	I	I	P	G	I	L	P	V	S	N	F	K	Q	A	K	K	F	A	D	M	T	N	V	R	.	.	.	.	.	I	P	A	W
Query Conservation																																																																									.	.	.	.	.
Alig confidence		.																																																																							.	.	.	.	.
Template Conservation		.
Template Sequence		.	K	P	H	D	F	A	V	H	I	D	S	Y	Y	E	L	G	V	N	I	F	G	G	C	C	G	T	T	P	E	H	V	K	L	F	R	K	V	L	G	N	R	K	P	L	Q	R	K	K	K	R	I	F	A	V	S	S	P	S	K	L	V	T	F	D	H	F	V	V	I	G	E	R	I	N	P	A	G	R	K
Template Known Secondary structure		.							T	T						T	T	T		S						T	T															S																	S	S					S	S	S											T	T
Template Predicted Secondary structure		.
Template SS confidence
			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.				.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																										.	.	.			.
Query SS confidence																																										.	.	.			.
Query Sequence		M	A	Q	M	F	D	G	L	D	D	D	A	E	T	R	K	L	V	G	A	N	I	A	M	D	M	V	K	I	L	S	R	E	G	V	K	D	F	H	F	.	.	.	Y	T	.	L	N	R	A	E	M	S	Y	A	I	C	H	T	L
Query Conservation																																										.	.	.			.
Alig confidence												.	.	.	.	.	.	.	.	.																						.	.	.			.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		K	L	W	A	E	M	Q	K	G	N	.	.	.	.	.	.	.	.	.	E	E	I	V	I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I	E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L
Template Known Secondary structure									T	T		.	.	.	.	.	.	.	.	.														T	T		S							S	S	G	G	G	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.										.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions