Job Description P0AEZ1 Confidence 32.48% Date Thu Jan 5 11:24:40 GMT 2012 Rank 131 Aligned Residues 223 % Identity 11% Template c2xdqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure															.										.
Query SS confidence															.										.
Query Sequence		M	E	Q	T	L	W	N	S	I	D	R	L	S	.	S	L	K	P	K	F	V	S	V	.	T	Y	G	A	N	S	G	E	R	D	R	T	H	S	I	I	K	G	I	K	D	R	T	G	L	E	A	A	P	H	L	T	C	I	D	A	T	P	D	E	L	R	T	I	A	R	D	Y	W	N	N	G	I	R	H	I
Query Conservation															.										.
Alig confidence															.										.																														.																									.	.
Template Conservation																																																							.																									.	.
Template Sequence		D	Y	E	E	L	K	R	L	C	L	E	I	K	R	D	R	N	P	S	V	I	V	W	I	G	T	C	T	T	E	I	I	K	M	D	L	E	G	L	A	P	K	L	E	A	E	I	G	I	P	I	V	V	.	A	R	A	N	G	L	D	Y	A	F	T	Q	G	E	D	T	V	L	A	A	M	A	A	R	.	.
Template Known Secondary structure																				S													T	T															S	S					.					T	T	T			T	T												T	T	.	.
Template Predicted Secondary structure																																																							.																									.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		V	A	L	R	G	D	L	P	P	G	S	G	K	P	.	.	.	.	.	E	M	Y	A	S	D	L	V	T	L	L	K	E	V	A	D	F	D	I	S	V	A	A	Y	P	E	V	H	P	E	A	K	S	A	Q	A	D	L	L	N	L	K	R	K	V	D	A	G	A	N	R	A	I	T	Q	F	F	F	D	V	E
Query Conservation																.	.	.	.	.
Alig confidence		.	.													.	.	.	.	.																												.	.	.	.	.										.	.	.	.	.
Template Conservation		.	.																																													.	.	.	.	.										.	.	.	.	.
Template Sequence		.	.	C	P	T	S	T	Q	Y	H	P	H	P	P	L	V	L	F	G	S	L	P	D	P	V	V	T	Q	L	T	L	E	L	K	K	Q	G	I	K	V	S	G	W	L	P	A	.	.	.	.	.	K	R	Y	T	E	L	P	V	I	.	.	.	.	.	D	E	G	Y	Y	V	A	G	V	N	P	F	L	S	R
Template Known Secondary structure		.	.									S								S															G	G	G	T								S		.	.	.	.	.	S	S	G	G	G					.	.	.	.	.		T	T						S	S	T	T
Template Predicted Secondary structure		.	.																																													.	.	.	.	.										.	.	.	.	.
Template SS confidence
				158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		S	Y	L	R	F	R	D	R	C	V	S	A	G	I	D	V	E	I	I	P	G	I	L	P	V	S	N	F	K	Q	A	K	K	F	.	.	.	A	D	M	T	N	V	R	I	P	A	W	M	A	Q	M	F	D	G	L	D	D	D	A	E	T	R	K	L	V	G	A	N	I	A	M	D	M	V	K	I	L	S	R
Query Conservation																																				.	.	.
Alig confidence										.	.	.	.	.																						.	.	.								.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																																.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	T	T	L	I	R	R	.	.	.	.	.	R	K	C	Q	L	I	T	A	P	F	P	I	G	P	D	G	T	R	T	W	I	E	Q	I	C	A	T	F	G	I	Q	.	P	Q	G	L	A	E	R	E	A	E	T	W	Q	K	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	E	L	V	R
Template Known Secondary structure									T	.	.	.	.	.	T										S	B																T	T			.			S											T	T			.	.	.	.	.	.	.	.	.	.	.	.						T
Template Predicted Secondary structure										.	.	.	.	.																																.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310													.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		E	G	V	K	D	F	H	F	Y	T	.	L	N	R	A	E	M	S	Y	A	I	C	H	T	L	G	V	R	P
Query Conservation												.
Alig confidence			.	.								.
Template Conservation			.	.
Template Sequence		G	.	.	K	S	V	F	F	M	G	D	N	L	L	E	I	S	L	A	R	F	L	I	R	C	G	M	R	V
Template Known Secondary structure		T	.	.									S	S												T	T
Template Predicted Secondary structure			.	.
Template SS confidence
		317			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions