Job Description P0AEZ1 Confidence 29.61% Date Thu Jan 5 11:24:40 GMT 2012 Rank 144 Aligned Residues 121 % Identity 13% Template c1uwvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma; PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase Resolution 1.95 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	E	M	E	Q	T	L	W	N	S	I	D	R	L	S	S	L	K	P	K	F	V	S	V	T	Y	G	A	N	S	G	E	R	D	R	T	H	S	I	I	K	G	I	K	D	R	T	G	L	E	A	A	P	H	L	T	C	I	D	A	T	P	D	E	L	R	T	I	A	R	D	Y	W	N	N	G	I	R	H
Query Conservation
Alig confidence																																				.	.										.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.										.	.	.	.	.	.	.	.	.
Template Sequence		N	A	G	V	N	Q	K	X	V	A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	X	G	N	F	.	.	T	L	P	L	A	T	Q	A	A	.	.	.	.	.	.	.	.	.	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N
Template Known Secondary structure		B																T			T	T							S		T	T	T	T	T	.	.						T	T	S	S	.	.	.	.	.	.	.	.	.							S															T	T			S
Template Predicted Secondary structure																																				.	.										.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.										310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130											.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure													.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	A	L	R	G	D	L	P	P	G	.	.	.	.	.	.	.	S	G	K	P	E	M	.	.	.	.	.	.	.	.	.	.	Y	A	S	D	L	V	T	L	L	K	E	V	A	D	F	D	I	S	V	A	A	Y	P	E	V	H	P	E	A	K	S	A	Q	A	D	L	L	N	L	K	R	K
Query Conservation													.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.			.																						.	.	.	.	.	.
Template Conservation																																						.																						.	.	.	.	.	.
Template Sequence		V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A	R	A	G	A	A	G	.	V	X	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	V	S	C	N	P	A	.	.	.	.	.	.	T	L	A	R	D	S	E	A	L	L	K	A
Template Known Secondary structure									T	T	S			S	S	S	G	G	G	T	T			S								T	T					.											S							S				.	.	.	.	.	.												T
Template Predicted Secondary structure																																						.																						.	.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.							.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions