|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | L | I | K | V | P | C | M | Q | I | T | N | M | H | C | S | G | Q | . |
. |
. |
T | V | S | L | A | A | G | D | Y | H | A | T | I | V | T | V | G | A | G | L | A | E | L | T | F | Q | G | . |
. |
. |
. |
. |
C | H | L | V | I | P | H | K | P | E | E | M | P | . |
. |
. |
L | A | H | L | G | K | V | L | I | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   | . | . | . |   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |
| . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |
|   |   |
|   |
|
Alig confidence |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
| . | . |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
Template Sequence |   |
M | . |
. |
A | S | V | T | R | A | V | F | G | E | L | P | S | G | G | G | T | V | E | K | F | Q | L | Q | S | D | L | L | R | V | D | I | I | S | W | G | C | T | I | T | A | L | E | V | K | D | R | Q | G | R | A | S | D | V | V | L | G | F | A | E | L | E | G | Y | L | Q | K | Q | P | Y | F | G | A | V | I | G | R |
Template Known Secondary structure |   |
B | . | . |
|  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  | T | B | T | T |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |
| B |
|
|
| S | S |  |  |  |  |  | S | S |
| S |
| T | T |
|  |  |
| S |
Template Predicted Secondary structure |   |
 | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | |
|
. | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | P | N | R | I | A | N | G | C | Y | R | Y | Q | G | Q | E | Y | Q | L | P | I | N | E | H | S | S | K | A | A | I | H | G | L | L | A | W | R | D | W | Q | I | . |
. |
S | E | L | T | A | T | S | V | T | L | T | A | F | L | P | P | S | Y | . |
G | Y | P | F | M | L | A | S | Q | V | V | Y | S | L | N | A | H | T |
Query Conservation |   |
  |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |
| . | . |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   | . |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |
|
|
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |
|   | . | . |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|
|
|   |
|   | . |   |   |
Template Sequence |   |
V | A | N | R | I | A | K | G | T | F | K | V | D | G | K | E | Y | H | L | A | I | N | K | . |
. |
E | P | N | S | L | H | G | G | V | R | G | F | D | K | V | L | W | T | P | R | V | L | S | N | G | V | Q | F | S | R | I | S | P | D | G | E | E | G | Y | P | G | E | L | K | V | W | V | T | Y | T | L | D | . |
G | G |
Template Known Secondary structure |   |
B |
| S |  |  | G | G | G |  |  |  |  | T | T |  |  |  |  |
|
|
| S | B | . | . | T | T | B |  |  | T | T | S | S | S |
| G | G | G | S | B |
|  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
| T | T | G | G | G |
|
| S |
|  |  |  |  |  |  |  |  |  |  | . | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
. | . |
  |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | S | V | E | I | A | S | Q | N | I | G | T | V | A | A | P | Y | G | V | G | I | H | P | Y | L | T | C | N | L | . |
. |
. |
T | S | V | D | E | Y | L | F | Q | L | P | A | N | Q | V | Y | A | V | D | E | H | A | N | P | T | T | . |
L | H | H | V | D | E | L | D | L | N | F | T | Q | A | K | K | I | A | A | T |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |   |
|   |
|
|
|
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
E | L | I | V | N | Y | . |
. |
R | A | Q | A | S | Q | A | T | P | V | N | L | T | N | H | S | Y | F | N | L | A | G | Q | A | S | P | N | I | N | D | H | E | V | T | I | E | A | D | T | Y | L | P | V | D | E | T | L | I | P | T | G | E | V | A | P | V | Q | G | T | A | F | D | L | R | K | P | V | E | L | G | K | H |
Template Known Secondary structure |   |
 |  |  |  |  |  | . | . |  |  |  |  | S | S |
|  |  |
| B |
|  |  |
|
|
| B |
| T | T |
| T | T |
| S |
|
| T | T |
|  |  |  |  |
|  |  |  |  |
|
| B |
| T | T | S |
| B |
| S |
|
|  |  |
| T | T | S | T | T |
|
| S | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  | . | . |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | |
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
  |   |
223 | |
|
|
|
|
|
|
. | . | . | . | . | . | 230 | . | |
|
|
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | . |
. |
. |
. |
. |
. |
. |
I | D | H | T | F | K | T | A | . |
. |
. |
N | D | L | W | E | M | T | I | T | H | P | Q | Q | A | L | S | V | S | L | C | S | D | Q | L | W | V | Q | V | Y | S | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | K | L | Q | R | Q | G | L | A | V | E | P | M | S | C | P | P |
Query Conservation |   |
  | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |
Alig confidence |   |
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |
| . |
Template Sequence |   |
L | Q | D | F | H | L | N | G | F | D | H | N | F | C | L | K | G | S | K | E | K | H | F | C | A | R | V | H | H | A | A | S | G | R | V | L | E | V | Y | T | T | Q | P | G | V | Q | F | Y | T | G | N | F | L | D | G | T | L | K | G | K | N | G | A | V | Y | P | K | H | S | G | F | C | L | E | T | Q | N | W | P | . |
Template Known Secondary structure |   |
 |  |  |  | T |
|
|
|
|  |  |  |  |  |  |
|
| S | S | S |
|  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |
|
| T | T |
|
| S |
|
| B |
| G | G | G |
| B |
|
| T | T | S |
| B |  |  |  |  |  | S |
| T | . |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | |
  |
  |   |
280 | . | . | . | . | |
. | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
| . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | A | F | N | S | . |
G | I | D | L | L | L | L | E | S | G | K | P | H | R | L | F | F | N | I | Y | G |
Query Conservation |   |
|
|   |
|   | . |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
D | A | V | N | Q | P | R | F | P | P | V | L | L | R | P | G | E | E | Y | D | H | T | T | W | F | K | F |
Template Known Secondary structure |   |
T | G | G | G |
| T | T | S |
|
|
|  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
313 | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . |
  |