Job Description P32139 Confidence 99.96% Date Thu Jan 5 11:49:25 GMT 2012 Rank 18 Aligned Residues 268 % Identity 11% Template c3ty1B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:hypothetical aldose 1-epimerase; PDBTitle: crystal structure of a hypothetical aldose 1-epimerase (kpn_04629)2 from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.90 a3 resolution Resolution 1.90 Å

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		19	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure											.								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query SS confidence											.								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query Sequence		Q	T	V	S	L	A	A	G	D	.	Y	H	A	T	I	V	T	.	V	G	A	G	L	A	E	L	T	F	Q	G	C	H	L	V	I	P	H	K	P	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	L	A	H	L	G	.	.	K	V	L	I	P	W	P	N	R	I	A	N	G	C
Query Conservation											.								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Alig confidence											.								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.
Template Conservation																																																																																.	.
Template Sequence		K	I	L	T	I	H	S	K	D	G	L	T	I	T	L	S	P	T	R	G	X	N	L	L	R	I	E	G	F	G	S	R	X	G	W	D	S	P	V	K	E	V	V	N	P	A	F	I	N	L	E	S	R	N	G	L	G	W	L	E	G	F	N	E	X	X	V	R	C	G	Y	E	W	T	G	H	P	V	.	.
Template Known Secondary structure									T	T	S							G	G	G	T	T								T	T								S			S				G	G	G			T	T					T	G	G	G	G	T				S							S			S	S			.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		Y	R	Y	Q	G	Q	E	Y	Q	L	P	I	N	E	H	S	S	K	A	A	I	H	G	L	L	A	W	R	D	W	Q	I	S	E	L	T	A	T	.	.	.	.	.	.	.	S	V	T	L	T	A	F	L	P	P	S	Y	G	Y	P	F	M	L	A	S	Q	V	V	Y	S	L	N	A	H	T	G	L	S	V	E
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence		.										.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.																											.
Template Conservation		.										.	.	.	.	.	.	.	.	.	.	.																																																			.
Template Sequence		.	T	A	D	G	Q	I	Y	T	L	.	.	.	.	.	.	.	.	.	.	.	H	G	K	A	G	N	T	P	A	S	L	V	E	V	E	V	A	D	S	A	P	Y	E	I	R	I	R	G	L	V	K	E	S	T	F	K	K	A	D	L	Q	T	L	T	E	L	R	Y	V	P	.	G	S	N	S	F	S	L	H
Template Known Secondary structure		.			T	T					T	.	.	.	.	.	.	.	.	.	.	.	T	B	S	G	G	G	S			S								S	S	T	T														T	T	T													T	.	T		S
Template Predicted Secondary structure		.										.	.	.	.	.	.	.	.	.	.	.																																																			.
Template SS confidence
			145	.	.	.	.	150	.	.	.												.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	S	Q	N	I	G	T	V	A	A	P	Y	G	V	G	I	H	P	Y	L	T	C	N	L	T	S	V	D	E	Y	L	F	Q	L	P	A	N	Q	V	Y	A	V	D	E	H	A	N	P	T	T	L	H	H	V	D	E	L	D	L	N	F	T	Q	A	K	K	I	A	A	T	K	I	D	H	T	F	K	T	A
Query Conservation
Alig confidence																													.																			.	.	.
Template Conservation																													.																			.	.	.
Template Sequence		D	V	L	T	N	H	A	D	Y	P	H	D	Y	Q	I	I	Y	H	S	N	F	G	T	P	I	L	E	.	E	G	A	R	F	L	A	P	I	S	S	I	S	P	F	N	D	Y	.	.	.	A	K	S	G	L	K	T	W	Q	T	Y	Q	G	P	T	K	D	F	D	E	X	V	F	N	I	Q	P	L	A	D	E
Template Known Secondary structure								S	S	S														T	T	T		S	.	T	T													S	S	G	G	.	.	.	G	G	G	G	S	T	T	T	T	B				S		T	T														T
Template Predicted Secondary structure																													.																			.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																							.	.	.									.	.																								.	.	.
Query SS confidence																							.	.	.									.	.																								.	.	.
Query Sequence		N	D	L	W	E	M	T	I	T	H	P	Q	Q	A	L	S	V	S	L	C	S	.	.	.	D	Q	L	W	V	Q	V	Y	.	.	S	G	E	K	L	Q	R	Q	G	L	A	V	E	P	M	S	C	P	P	N	A	F	N	.	.	.	S	G	I	D	L	L	L	L	E	S	G	K	P	H	R	L	F	F	N	I
Query Conservation																							.	.	.									.	.																								.	.	.
Alig confidence																							.	.	.									.	.																								.	.	.
Template Conservation
Template Sequence		N	H	Q	T	L	A	A	V	V	N	K	A	G	D	K	G	A	S	I	Q	F	D	T	R	Q	L	P	V	L	T	L	W	K	N	T	D	T	V	K	Q	G	Y	V	T	G	I	E	P	G	T	S	Y	A	Y	P	V	T	I	E	R	K	Q	K	R	V	K	Q	L	Q	P	G	A	S	A	Q	F	D	L	T	Y
Template Known Secondary structure		T	S									S	S	S	S									T	T	T													T	T	T										S	S		S	S								T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		304	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		368	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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