Job Description P32139 Confidence 100.00% Date Thu Jan 5 11:49:25 GMT 2012 Rank 12 Aligned Residues 274 % Identity 20% Template c3q1nA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:galactose mutarotase related enzyme; PDBTitle: crystal structure of a galactose mutarotase-like protein (lsei_2598)2 from lactobacillus casei atcc 334 at 1.61 a resolution Resolution 1.61 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		T	V	S	L	A	A	G	D	Y	H	A	T	I	V	T	V	G	A	G	L	A	E	L	T	F	Q	.	.	G	C	H	L	V	I	P	H	K	P	E	E	M	P	L	A	H	L	G	K	V	L	I	P	W	P	N	R	I	A	N	G	C	Y	R	Y	Q	G	Q	E	Y	Q	L	P	I	N	E	H	S	S	K	A
Query Conservation																												.	.
Alig confidence																												.	.														.	.																															.	.	.	.	.	.	.
Template Conservation																																											.	.																															.	.	.	.	.	.	.
Template Sequence		X	I	T	I	E	N	S	K	F	K	A	G	I	A	E	R	G	A	E	L	Q	S	L	V	N	K	A	D	N	Y	E	Y	V	W	T	G	D	K	T	F	W	.	.	N	R	H	A	P	I	L	F	P	S	I	G	K	S	N	Q	D	Q	Y	R	L	G	A	K	T	Y	P	X	S	Q	.	.	.	.	.	.	.
Template Known Secondary structure								S	S							T	B	T	T								T	T	T	T				B					T	T	T		.	.	S		S					B	S			S			G	G	G					T	T							T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.																															.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		A	I	H	G	L	L	A	W	R	D	W	Q	I	S	E	L	T	A	T	S	V	T	L	T	A	F	L	P	P	S	.	.	Y	G	Y	P	F	M	L	A	S	Q	V	V	Y	S	L	N	A	H	T	G	L	S	V	E	I	A	S	Q	N	I	G	T	V	A	A	P	Y	G	V	G	I	H	P	Y	L	T	C	N
Query Conservation																																.	.
Alig confidence		.	.																													.	.																	.
Template Conservation		.	.																																															.
Template Sequence		.	.	H	G	F	A	R	D	Y	D	F	D	V	S	D	K	S	D	S	A	V	T	F	T	Q	H	Q	N	A	E	T	L	K	K	F	P	F	E	Y	T	L	A	V	T	Y	X	L	T	.	D	G	G	L	S	V	H	Y	T	V	T	N	D	D	S	K	S	X	P	F	A	L	G	F	H	P	A	F	N	V	G
Template Known Secondary structure		.	.	T	B	S	G	G	G	S	B					S			S	S																S														.	T	T												S	S	S
Template Predicted Secondary structure		.	.																																															.
Template SS confidence
				72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
					176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																												.	.													.	.
Query SS confidence		.	.	.																																												.	.													.	.
Query Sequence		.	.	.	L	T	S	V	D	E	Y	L	F	Q	L	P	A	N	Q	V	Y	A	V	D	E	H	A	N	P	T	T	L	H	H	V	D	E	L	D	L	N	F	T	Q	A	K	K	.	.	I	A	A	T	K	I	D	H	T	F	K	T	.	.	A	N	D	L	W	E	M	T	I	T	H	P	Q	Q	A	L	S	V
Query Conservation		.	.	.																																												.	.													.	.
Alig confidence		.	.	.																																												.	.													.	.
Template Conservation
Template Sequence		L	K	A	D	G	S	F	D	D	Y	D	L	T	V	E	P	L	N	S	P	L	Q	R	F	G	I	G	P	V	P	F	R	N	G	D	V	E	D	I	P	G	A	E	G	N	R	L	P	L	T	H	D	L	L	D	G	G	L	V	I	L	A	N	S	E	I	A	K	A	T	L	A	S	P	H	H	D	H	S	I
Template Known Secondary structure		B		T	T	S	S	B		S									S	S								S	S	T	T	S									T	T		B	T	T										T	T								T	T									T	T		S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		249	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure					.																																			.	.	.	.	.	.
Query SS confidence					.																																			.	.	.	.	.	.
Query Sequence		S	L	C	.	S	D	Q	L	W	V	Q	V	Y	S	G	E	K	L	Q	R	Q	G	L	A	V	E	P	M	S	C	P	P	N	A	F	N	S	G	.	.	.	.	.	.	I	D	L	L	L	L	E	S	G	K	P	H	R	L	F	F	N	I	Y	G
Query Conservation					.																																			.	.	.	.	.	.
Alig confidence					.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	D	I	S	D	F	P	Y	L	T	I	W	S	P	E	H	K	K	A	P	F	I	A	V	E	P	F	D	G	L	P	D	Q	A	G	E	P	T	D	W	Y	T	K	L	G	N	T	T	L	S	A	G	A	N	K	Q	L	A	L	K	V	E	L
Template Known Secondary structure						T	T		S								T	T	S			S									S				B	S	S	S			B	T	T	T		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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