Job Description P32139 Confidence 83.20% Date Thu Jan 5 11:49:25 GMT 2012 Rank 26 Aligned Residues 177 % Identity 11% Template c3mi6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of the alpha-galactosidase from lactobacillus2 brevis, northeast structural genomics consortium target lbr11. Resolution 2.70 Å

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		101	.	.	.	.	.	.	.	.	110	.																				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		G	L	L	A	W	R	D	W	Q	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	T	A	T	S	V	T	L	T	A	F	L	P	P	S	Y	G	Y	P	F	M	L	A	S	Q	V	V	Y	S	L	N	A	H	.	T	G	L	S	V	E	I	A	S	Q	N	I	G	T	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.														.
Template Conservation																																																		.	.	.
Template Sequence		N	G	S	R	I	T	E	L	T	Y	D	H	Y	Q	L	L	T	G	K	Q	R	L	A	N	L	P	S	T	F	D	D	T	D	D	D	A	Q	T	L	V	V	S	F	N	D	R	I	T	.	.	.	G	L	A	L	D	L	N	Y	S	I	F	P	H	Q	D	V	I	V	K	S	A	K	F	T	N	P	S	S	E
Template Known Secondary structure		T	S																S					S	S	S							S														T	T	T	.	.	.												G	G	G	T												S	S	S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	P	Y	G	V	G	I	H	P	Y	L	T	C	N	L	T	S	V	D	E	Y	L	F	Q	L	P	A	N	Q	V	Y	A	V	D	E	H	A	N	P	T	T	L	H	H	V	D	E	L	D	L	N	F	T	Q	A	K	K	I	A	A	T	K	I	D	H	T	F	K	T	A	N	D	L	W	E	M	T	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	V	L	N	R	A	L	S	S	Q	L	D	L	P	D	A	N	Y	D	L	I	Q	F	S	G	T	W	A	R	E	R	H	L	Y	R	H	P	L	R	P	G	X	Q	S	I	S	S	L	R	X	A	S	S	H	Q	Q	N	P	F	X	X	L	A	R	P	Q	T	T	D	E	Q	G	A	V	F	G	F	N	L
Template Known Secondary structure																S													T	T												S									S	S	S	S		S	S	B		S							T	T			S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	Q	Q	A	L	S	V	S	L	C	S	D	Q	L	W	V	Q	V	Y	S	G	E	K	L	Q	R	Q	G	L	A	V	E	P	M	S	C	P	P	N	A	F	N	S	G	I	D	L	L	L	L	E	S	G	K	P	H	R
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	S	G	N	F	L	D	A	I	E	V	D	Q	.	.	.	.	.	.	.	.	.	Y	S	T	S	R	I	L	T	G	I	.	.	.	.	.	.	.	.	.	N	P	D	E	F	G	W	N	L	A	P	Q	A	T	F	Q
Template Known Secondary structure		S			S	S									T	.	.	.	.	.	.	.	.	.	T	S									.	.	.	.	.	.	.	.	.		S	T	T							T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.										.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions