Job Description P32139 Confidence 100.00% Date Thu Jan 5 11:49:25 GMT 2012 Rank 4 Aligned Residues 280 % Identity 19% Template c3imhB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:galactose-1-epimerase; PDBTitle: crystal structure of galactose 1-epimerase from lactobacillus2 acidophilus ncfm Resolution 1.76 Å

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		19	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure											.																																	.	.	.
Query SS confidence											.																																	.	.	.
Query Sequence		Q	T	V	S	L	A	A	G	D	.	Y	H	A	T	I	V	T	V	G	A	G	L	A	E	L	T	F	Q	G	C	H	L	V	I	P	H	K	P	E	E	M	P	.	.	.	L	A	H	L	G	K	V	L	I	P	W	P	N	R	I	A	N	G	C	Y	R	Y	Q	G	Q	E	Y	Q	L	P	I	N	E	H	S
Query Conservation											.																																	.	.	.
Alig confidence											.																																	.	.	.																																		.	.
Template Conservation																																																																																.	.
Template Sequence		C	E	I	T	L	E	N	D	A	G	M	A	V	K	V	L	N	Y	G	A	T	L	E	K	V	L	L	D	G	E	N	M	I	L	S	L	N	S	P	E	D	Y	S	K	E	R	N	F	L	G	G	T	V	G	R	I	A	G	R	V	R	A	G	Q	W	K	H	G	N	E	I	H	Q	L	P	L	N	D	.	.
Template Known Secondary structure									S	S	S							T	B	T	T								T	T				B				S	S	G	G	G	G	G	T	S				T	T					S	B		S			G	G	G					T	T									B	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		95	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.								.	.	.																			.
Query SS confidence											.	.								.	.	.																			.
Query Sequence		S	K	A	A	I	H	G	L	L	.	.	A	W	R	D	W	Q	I	.	.	.	S	E	L	T	A	T	S	V	T	L	T	A	F	L	P	P	S	Y	.	G	Y	P	F	M	L	A	S	Q	V	V	Y	S	L	N	A	H	T	G	L	S	V	E	I	A	S	Q	N	I	G	T	V	A	A	P	Y	G	V	G	I
Query Conservation											.	.								.	.	.																			.
Alig confidence											.	.								.	.	.																			.																		.	.
Template Conservation																																																											.	.
Template Sequence		G	D	N	H	I	H	G	G	I	G	T	D	M	H	V	W	D	F	R	P	S	C	D	S	E	H	A	R	V	D	L	T	L	F	D	P	D	G	N	N	D	Y	P	G	N	L	K	L	H	A	R	Y	E	L	D	N	E	.	.	N	N	L	H	Y	L	L	E	A	V	S	D	K	L	T	I	F	N	P	V	N
Template Known Secondary structure		T	T	B			T	T	S	S		G	G	G	S	B									S	S												T	T	G	G	G			S												T	T	.	.	S											S	S	S				B
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.													.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																				.																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	Y	L	T	C	N	L	T	S	V	D	E	Y	L	F	Q	L	P	A	N	Q	V	Y	A	V	D	E	H	A	N	P	T	T	.	L	H	H	V	D	E	L	D	L	N	F	T	Q	A	K	K	I	A	A	T	K	.	.	.	.	.	.	.	.	.	.	.	.	I	D	H	T	F	K	T	A	N	D	L	W
Query Conservation																																				.																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																										.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		H	T	Y	F	N	L	G	E	.	R	A	E	D	L	N	L	Q	M	N	A	D	Y	Y	L	P	V	D	E	A	G	L	P	D	R	G	M	A	E	V	A	G	T	A	F	D	F	R	K	T	K	R	I	G	D	A	L	N	S	D	D	S	Q	I	K	L	R	N	G	L	D	H	P	F	I	L	N	G	N	N	P
Template Known Secondary structure							T	T	S	.		G	G	G													B		T	T	S	S	B	S	S						T	T	S	T	T			S	S									T	S									T	S									S		S
Template Predicted Secondary structure										.
Template SS confidence
		173	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.											.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	T	I	T	H	P	Q	Q	A	L	S	V	S	L	C	S	D	Q	L	W	V	Q	V	Y	S	G	.	.	.	.	.	.	.	.	.	.	E	K	L	Q	R	Q	G	L	A	V	E	P	M	S	C	P	P	N	A	F	N	S	G	I	D	L	L	L	L	E	S	G	K	P	H	R	L	F	F	N	I	Y	G
Query Conservation																													.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																						.	.	.	.	.	.	.	.	.	.																.							.
Template Conservation						.	.																																															.							.
Template Sequence		A	A	L	L	.	.	S	S	N	K	H	R	L	I	V	K	T	N	A	P	A	L	V	L	Y	A	G	N	H	F	N	H	T	G	I	V	N	N	I	G	Q	Y	D	G	I	T	F	E	A	Q	C	P	.	P	A	E	G	N	D	.	L	G	Q	I	T	L	L	P	F	E	K	F	K	R	T	V	D	W	K	F
Template Known Secondary structure		S				.	.			S	S								S	S	S								T	T			S		G	G	G	T	T			T	T	S								S		.			S	S	S	B	.		G	G	G				T	T
Template Predicted Secondary structure						.	.																																															.							.
Template SS confidence
		252	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		306	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		328	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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