Job Description P32139 Confidence 5.20% Date Thu Jan 5 11:49:25 GMT 2012 Rank 81 Aligned Residues 49 % Identity 12% Template c2aenH_ PDB info PDB header:viral protein Chain: H: PDB Molecule:outer capsid protein vp4, vp8* core; PDBTitle: crystal structure of the rotavirus strain ds-1 vp8* core Resolution 1.60 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130								.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		W	Q	I	S	E	L	T	A	T	S	V	T	L	T	A	F	L	P	P	S	Y	G	Y	.	.	.	.	.	.	.	P	F	M	L	A	S	Q	V	V	Y	S	L	N	A	H	T	G	L	S	V	E	I	A	S	Q	N	I	G	T	V
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																						.			.	.	.	.	.	.	.																.	.	.
Template Conservation																						.																									.	.	.
Template Sequence		W	L	L	I	S	S	N	T	N	G	V	V	Y	E	S	T	N	N	N	D	.	F	W	T	A	V	I	A	V	E	P	H	V	S	Q	T	N	R	Q	Y	I	L	F	G	E	.	.	.	N	K	Q	F	N	V	E	N	N	S	D	K
Template Known Secondary structure									S	S									S	S	S	.										S	S											T	T		.	.	.										S	S	S
Template Predicted Secondary structure																						.																									.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions