Job Description P32139 Confidence 100.00% Date Thu Jan 5 11:49:25 GMT 2012 Rank 5 Aligned Residues 286 % Identity 22% Template c1ygaA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:hypothetical 37.9 kda protein in bio3-hxt17 PDBTitle: crystal structure of saccharomyces cerevisiae yn9a protein,2 new york structural genomics consortium Resolution 2.00 Å

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		19	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure											.																																	.	.	.
Query SS confidence											.																																	.	.	.
Query Sequence		Q	T	V	S	L	A	A	G	D	.	Y	H	A	T	I	V	T	V	G	A	G	L	A	E	L	T	F	Q	G	C	H	L	V	I	P	H	K	P	E	E	M	P	.	.	.	L	A	H	L	G	K	V	L	I	P	W	P	N	R	I	A	N	G	C	Y	R	Y	Q	G	Q	E	Y	Q	L	P	I	N	E	H	S
Query Conservation											.																																	.	.	.
Alig confidence											.																																	.	.	.
Template Conservation
Template Sequence		G	V	I	T	I	G	D	E	K	K	F	Q	A	T	I	A	P	L	G	A	T	L	V	D	L	K	V	N	G	Q	S	V	V	Q	G	Y	S	N	V	Q	D	Y	L	T	D	G	N	M	M	G	A	T	V	G	R	Y	A	N	R	I	A	K	G	V	F	S	L	D	D	G	P	H	K	L	T	V	N	N	C	G
Template Known Secondary structure									T	T	T							T	B	T	T								T	T				B				S	S	G	G	G	G	T	T		S	S		T	T					S	B		S			G	G	G					T	T									B	T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		95	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure							.	.																			.	.	.	.	.												.	.	.	.																	.
Query SS confidence							.	.																			.	.	.	.	.												.	.	.	.																	.
Query Sequence		S	K	A	A	I	.	.	H	G	L	L	A	W	R	D	W	Q	I	S	E	L	T	A	T	S	.	.	.	.	.	V	T	L	T	A	F	L	P	P	S	Y	.	.	.	.	G	Y	P	F	M	L	A	S	Q	V	V	Y	S	L	N	A	.	H	T	G	L	S	V	E	I	A	S	Q	N	I	G	T	V	A	A
Query Conservation							.	.																			.	.	.	.	.												.	.	.	.																	.
Alig confidence							.	.						.													.	.	.	.	.												.	.	.	.																	.
Template Conservation														.
Template Sequence		N	T	N	H	S	S	I	S	S	L	N	L	.	K	Q	Y	K	A	S	P	V	E	N	P	S	K	G	V	Y	V	V	E	F	K	L	L	D	D	H	T	Q	P	N	P	N	E	F	P	G	D	L	E	V	T	V	K	Y	T	L	N	V	A	E	M	T	L	D	M	E	Y	Q	A	Q	L	V	R	G	D	A	T
Template Known Secondary structure		B			T	T	G	G	G		G	G	G	.	S	B											T	T												S	S	S	S	S				S	S	S												T	T	T	T													S	S
Template Predicted Secondary structure														.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																.	.	.	.																					.							.																						.	.											.
Query SS confidence																.	.	.	.																					.							.																						.	.											.
Query Sequence		P	Y	G	V	G	I	H	P	Y	L	T	C	N	L	.	.	.	.	T	S	V	D	E	Y	L	F	Q	L	P	A	N	Q	V	Y	A	V	D	E	.	H	A	N	P	T	T	.	L	H	H	V	D	E	L	D	L	N	F	T	Q	A	K	K	I	A	A	T	K	.	.	I	D	H	T	F	K	T	A	N	D	.
Query Conservation																.	.	.	.																					.							.																						.	.											.
Alig confidence																.	.	.	.																					.							.																						.	.											.
Template Conservation
Template Sequence		P	I	N	M	T	N	H	S	Y	F	N	L	N	K	V	K	S	E	K	S	I	R	G	T	E	V	K	V	C	S	N	K	S	L	E	V	T	E	G	A	L	L	P	T	G	K	I	I	E	R	N	I	A	T	F	D	S	T	K	P	T	V	L	H	E	D	T	P	V	F	D	C	T	F	I	I	D	A	N	K
Template Known Secondary structure				B							B		T	T	T	T	T		T	T			T	T						S									T	T	T											S			B	T	T		S	S						S	S											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
															234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.																									.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.																									.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	W	E	M	T	I	T	H	P	Q	Q	A	L	S	V	S	L	C	S	D	Q	L	W	V	Q	V	Y	S	G	.	.	.	.	.	E	K	L	Q	R	Q	G	L	A	V	E	P	M	S	C	P	P	N	A	F	N	S	G	I	.	.	D	L	L	L	L	E	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.																.									.	.
Template Conservation																																																																.
Template Sequence		D	L	K	T	T	D	S	V	S	V	N	K	L	V	P	V	F	K	A	Y	H	P	E	S	H	I	K	F	E	V	S	T	T	E	P	T	V	H	L	Y	T	G	D	N	L	C	G	K	F	V	P	R	S	G	F	A	V	Q	Q	G	R	Y	.	V	D	A	I	N	R	D	E	W	R	G	C	V	L	L	K	R
Template Known Secondary structure		T			S	S	B		T	T	T	S											T	T	T									S	S	S								T	T			T	T	S		T	T	S		B						S		.	S	S	G	G	G						G	G	G				T
Template Predicted Secondary structure																																																																.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	P	H	R	L	F	F	N	I	Y	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	V	Y	T	S	K	T	Q	Y	K	F	D
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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