Job Description P32139 Confidence 8.59% Date Thu Jan 5 11:49:25 GMT 2012 Rank 57 Aligned Residues 124 % Identity 11% Template c1v7wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:chitobiose phosphorylase; PDBTitle: crystal structure of vibrio proteolyticus chitobiose phosphorylase in2 complex with glcnac Resolution 1.60 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	G	D	Y	H	A	T	I	V	T	V	G	A	G	L	A	E	L	T	F	Q	G	C	H	L	V	I	P	H	K	P	E	E	M	P	L	A	H	L	G	K	V	L	I	P	W	P	N	R	I	A	N	G	C	Y	R	Y	Q	G	Q	E	Y	Q	L	P	I	N	E	H	S	S	K	A	A	I	H	G	L
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Sequence		L	G	T	E	K	F	C	T	V	I	S	H	N	A	G	G	Y	S	F	Y	N	S	P	E	Y	N	R	V	T	K	F	R	P	N	A	T	F	D	R	P	G	H	Y	V	Y	L	R	D	D	D	.	.	.	.	.	.	.	.	.	S	G	D	Y	W	S	I	S	.	.	.	.	.	.	W	Q	P	V	A	K	S
Template Known Secondary structure				S	S	S							T	T	S	B						S		T	T	T		B		B			B		S	S	S	S		B	S	B								T	T	.	.	.	.	.	.	.	.	.	T						S	S	.	.	.	.	.	.	S	T	T	T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.										.	.	80	.	.	.	.	.							.	.	.	.	90	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		L	A	W	R	D	W	Q	I	S	E	L	T	A	T	S	V	T	L	T	A	F	L	P	P	S	Y	G	Y	P	F	M	L	A	S	Q	V	V	Y	S	L	N	.	A	H	T	G	L	S	V	E	I	A	S	Q	N	I	G	T	V	A	A	P	Y	G	V	G	I	H
Query Conservation																																											.
Alig confidence											.															.	.	.	.	.	.	.											.
Template Conservation											.															.	.	.	.	.	.	.
Template Sequence		L	D	E	A	Q	Y	Q	I	R	.	H	G	L	S	Y	S	K	F	Q	C	D	Y	N	G	.	.	.	.	.	.	.	I	H	A	R	K	T	L	F	V	P	K	G	E	D	A	E	I	W	D	V	V	I	K	N	T	S	D	Q	V	R	T	I	S	A	F	S	F
Template Known Secondary structure		T	T	T							.			T	T									T	T	.	.	.	.	.	.	.											T	T	S	S												S	S	S
Template Predicted Secondary structure											.															.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions