|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
M | A | L | N | L | Q | D | K | Q | A | I | V | A | E | V | S | E | V | A | K | G | A | L | S | A | V | V | A | D | S | R | G | V | T | V | D | K | M | T | E | L | R | K | A | G | R | E | A | G | . |
V | Y | M | R | V | V | R | N | T | L | L | R | R | A | V | E | G | T | P | F | E | C | L | K | D | A | . |
. |
. |
. |
Query Conservation |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   | . |   |   |   |   |
|   |
|
|
|
|   |   |   |
|
|   |   |
|   |   |
|   |
|   |   |   | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |
|
|   |
|
|
|   |   | . | . | . | . |
|
|   |   |
|   |   |
|   |
|   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |
Template Sequence |   |
M | D | L | S | T | K | Q | K | Q | H | . |
. |
. |
. |
L | K | G | L | A | H | P | L | K | P | V | V | L | L | G | S | N | G | L | T | E | G | V | L | A | E | I | E | Q | A | L | E | H | H | E | L | I | K | V | K | I | A | T | E | D | R | E | T | K | T | L | I | V | E | A | I | V | R | E | T | G | A | C | N | V | Q |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  | . | . | . | . |  |  |  |  |  | T | T |
|
|
| S |  |  |  |
| T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | |
|
|
|
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | V | G | P | T | L | I | A | Y |
Query Conservation |   |
|   |
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|
|
|
Template Sequence |   |
V | I | G | K | T | L | V | L | Y |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . |
  |