Job Description P0A7J3 Confidence 99.86% Date Thu Jan 5 11:05:46 GMT 2012 Rank 3 Aligned Residues 99 % Identity 23% Template c3jyw8_ PDB info PDB header:ribosome Chain: 8: PDB Molecule:60s ribosomal protein lp0; PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution Resolution 8.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		L	Q	D	K	Q	A	I	V	A	E	V	S	E	V	A	K	G	A	L	S	A	V	V	A	D	S	R	G	V	T	V	D	K	M	T	E	L	R	K	A	G	R	E	A	G	V	Y	M	R	V	V	R	N	T	L	L	R	R	A	V	E	G	T	.	.	.	.	.	P	F	E	C	L	K	D	A	F	V	G	P
Query Conservation																																																																	.	.	.	.	.
Alig confidence																																													.																				.	.	.	.	.
Template Conservation																																													.
Template Sequence		R	E	K	K	A	E	Y	F	A	K	L	R	E	Y	L	E	E	Y	K	S	L	F	V	V	G	V	D	N	V	S	S	Q	Q	M	H	E	V	R	K	E	L	R	G	.	R	A	V	V	L	M	G	K	N	T	M	V	R	R	A	I	R	G	F	L	S	D	L	P	D	F	E	K	L	L	P	F	V	K	G	Y
Template Known Secondary structure																										B			S			T								T	T	S		S	.	S				S													S			S	S	S			S	T	T		T	T	T		S	S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	A	Y	S	M	E	H	P	G	A	A	A	R	L	F	K	E	F	A	K	A	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	F	V	F	T	N	E	P	L	T	E	I	K	N	V	I	V	S	N	R	V	A	A	P
Template Known Secondary structure		B					S	S	S													T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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