Job Description P0A7J3 Confidence 8.27% Date Thu Jan 5 11:05:46 GMT 2012 Rank 29 Aligned Residues 70 % Identity 11% Template c3f43A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution Resolution 1.59 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure															.															.	.	.	.	.	.																					.
Query SS confidence															.															.	.	.	.	.	.																					.
Query Sequence		Q	A	I	V	A	E	V	S	E	V	A	K	G	.	A	L	S	A	V	V	A	D	S	R	G	V	T	V	.	.	.	.	.	.	D	K	M	T	E	L	R	K	A	G	R	E	A	G	V	Y	M	R	V	V	.	R	N	T	L	L	R	R	A	V	E	G	T	P	F	E	C	L	K	D	A	F	V	G
Query Conservation															.															.	.	.	.	.	.																					.
Alig confidence															.															.	.	.	.	.	.																					.
Template Conservation
Template Sequence		H	L	F	K	K	W	V	F	D	E	F	L	N	K	G	Y	N	K	I	F	L	V	L	S	D	V	E	S	I	D	S	F	S	L	G	V	I	V	N	I	L	K	S	I	S	S	S	G	G	F	F	A	L	V	S	P	N	E	K	V	E	R	V	L	S	L	T	N	L	D	R	I	V	K	I	Y	D	T
Template Known Secondary structure												T	G	G	G	T									T	T																							T																			T	T	G	G	G	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions