Job Description P0A7J3 Confidence 3.79% Date Thu Jan 5 11:05:46 GMT 2012 Rank 64 Aligned Residues 50 % Identity 18% Template c2ykqC_ PDB info PDB header:rna-binding protein Chain: C: PDB Molecule:line-1 orf1p; PDBTitle: structure of the human line-1 orf1p trimer Resolution 3.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																		.	.	.
Query SS confidence															.	.	.	.																		.	.	.
Query Sequence		Q	D	K	Q	A	I	V	A	E	V	S	E	V	.	.	.	.	A	K	G	A	L	S	A	V	V	A	D	S	R	G	V	T	V	.	.	.	D	K	M	T	E	L	R	K	A	G	R	E	A	G	V	Y	M	R	V	V
Query Conservation															.	.	.	.																		.	.	.
Alig confidence															.	.	.	.																		.	.	.
Template Conservation
Template Sequence		E	X	K	E	K	X	L	R	A	A	R	E	K	G	R	V	T	L	K	G	K	P	I	R	L	T	V	D	L	S	A	E	T	L	Q	A	R	R	E	W	G	P	I	F	N	I	L	K	E	K	N	F	Q	P	R	I	S
Template Known Secondary structure																				T	T																				S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions