Return to main results Retrieve Phyre Job Id

Job DescriptionP76373
Confidence98.26%DateThu Jan 5 12:22:27 GMT 2012
Rank209Aligned Residues117
% Identity16%Templated7mdha1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1....... .10.........20... ......30.. .......40.........50.........60.....
Predicted Secondary structure 

.



........

......














Query SS confidence 







.














. . . . . . . .








. . . . . .
































Query Sequence  MKITISGT. GYVGLSNGLLIAQNH. . . . . . . . EVVALDILP. . . . . . SRVAMLNDRISPIVDKEIQQFLQSDKIHFNATL
Query Conservation 


 



.
 


 

  

 
 ........ 
 
 
   ......  
  
  
     
  
 
 
      
  
 
Alig confidence 







.














........








......













............






Template Conservation   

 



 
 

   
  
    
       

 
 

        
 



 
      ............  
 
  
Template Sequence  VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL. . . . . . . . . . . . REVSIGI
Template Known Secondary structure  TTTSTTTT
TT



GGGTTT
TT............S
Template Predicted Secondary structure 




















............


Template SS confidence 















































































   47..50.........60.........70.........80.........90.........100....... ..110....
 
   66...70.........80.........90.... .....100....... ..110.........120.........130
Predicted Secondary structure 


















.....
.







Query SS confidence 




























. . . . .












.






















Query Sequence  DKNEAYRDADYVIIATPTDYDPKTNYFNT. . . . . SSVESVIKDVVEI. NPYAVMVIKSTVPVGFTAAMHKK
Query Conservation          





 


           .....  
      
  
.  
 


  


 



  
   
Alig confidence 




























.....












.










.










Template Conservation     


  








     
 

  

  
  
       
   
 
   





.


    
  
Template Sequence  DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN. PCNTNALICLK
Template Known Secondary structure 
TTT
S






TT

S
TT

SS.S
Template Predicted Secondary structure 




















.
Template SS confidence 






































































   115....120.........130.........140.........150.........160.........170... ......180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions