Job Description P76373 Confidence 99.92% Date Thu Jan 5 12:22:27 GMT 2012 Rank 25 Aligned Residues 247 % Identity 18% Template c3qhaB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from mycobacterium2 avium 104 Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I
Query Conservation																							.
Alig confidence																							.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	L	G	Y	I	G	L	G	N	M	G	A	P	M	A	T	R	M	T	E	W	P	G	G	V	T	V	Y	D	I	R	I	E	A	M	T	P	L	A	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	L	A	D	S	V	A	D	V	A	A	A	D	L	I	H	I	T
Template Known Secondary structure										S	T	T								G	G	G	S	T	T							S										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S	S					T	T	S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	S	P	E	F	L	R	E	G	K	A	L	Y	D	N	L	H	P	S	R	I	V
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.																																																																	.
Template Conservation					.	.	.	.	.	.	.	.	.	.																																																																	.
Template Sequence		V	L	D	.	.	.	.	.	.	.	.	.	.	D	A	Q	V	R	E	V	V	G	E	L	A	G	H	A	K	P	G	T	V	I	A	I	H	S	T	I	S	D	T	T	A	V	E	L	A	R	D	L	K	A	R	D	I	H	I	V	D	A	P	V	S	G	G	A	A	A	A	A	R	G	E	L	A	.	T	M
Template Known Secondary structure			S	S	.	.	.	.	.	.	.	.	.	.													T	T			T	T							S															G	G	G	T										S								T				.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																																																																	.
Template SS confidence
		74	.	.											.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		I	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R	Q	I	I	E	G	V	C	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																							.	.	.																																																			.	.	.	.	.	.
Template Conservation																							.	.	.
Template Sequence		V	G	A	D	R	E	V	Y	E	R	I	K	P	A	F	K	H	W	A	A	V	.	.	.	V	I	H	A	G	E	P	G	A	G	T	R	M	K	L	A	R	N	M	L	T	F	T	S	Y	A	A	A	C	E	A	M	K	L	A	E	A	A	G	L	D	L	Q	A	L	G	R	V	V	R	H	T	D	A	L	T
Template Known Secondary structure																							.	.	.						S	T	T																														T	T
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
													234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	L	D	P	R	I	G	N	H	Y	N	N	P	S	F	G	Y	G	G	Y	C	L	P	K	D	T	K	Q	L	.	.	L	A	N	Y	Q	S	V	P	N	N	L	I	S	A	I	V	D	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		G	G	P	G	A	I	M	V	R	D	N	M	K	D	L	E	P	D	N	F	L	Y	Q	P	F	L	H	T	R	G	L	G	E	K	D	L	S	L	A	L	A	L	G	E	A	V	S	V	D	L	P	L	A	R	L	A	Y	E	G
Template Known Secondary structure				G	G	G	G				S	S						T	T	S	T	T																									T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions