Job Description P76373 Confidence 99.90% Date Thu Jan 5 12:22:27 GMT 2012 Rank 31 Aligned Residues 255 % Identity 15% Template c3pefA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, nad-binding; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+ Resolution 2.07 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I	A
Query Conservation																						.
Alig confidence																						.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		K	F	G	F	I	G	L	G	I	M	G	S	A	M	A	K	N	L	V	K	A	G	C	S	V	T	I	W	N	R	S	P	E	K	A	E	E	L	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	R	A	A	T	P	.	E	V	V	E	S	C	P	V	T	F	A	M
Template Known Secondary structure									S													T	T								S	S	G	G	G	G						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S			.							S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																			.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	S	P	E	F	L	R	E	G	K	A	L	Y	D	N	L	H	P	S	R	I	V	I
Query Conservation
Alig confidence																			.	.	.	.	.	.																																																						.
Template Conservation																			.	.	.	.	.	.																																																						.
Template Sequence		L	A	D	P	A	A	A	E	E	V	C	F	G	K	H	G	V	.	.	.	.	.	.	L	E	G	I	G	E	G	R	G	Y	V	D	M	S	T	V	D	P	A	T	S	Q	R	I	G	V	A	V	V	A	K	G	G	R	F	L	E	A	P	V	S	G	S	K	K	P	A	E	D	G	T	L	I	.	I	L	A
Template Known Secondary structure			S	S										S	T	T			.	.	.	.	.	.						T	T							S																	T	T																		T				.
Template Predicted Secondary structure																			.	.	.	.	.	.																																																						.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R	Q	I	I	E	G	V	C	L	D	P	R	I	G	N
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		A	G	D	R	N	L	Y	D	E	A	M	P	G	F	E	K	M	.	.	.	G	K	K	I	I	H	L	G	D	V	G	K	G	A	E	M	K	L	V	V	N	M	V	M	G	G	M	M	A	C	F	C	E	G	L	A	L	G	E	K	A	G	L	A	T	D	A	I	L	D	V	I	G	A	G	A	M	A	N	P
Template Known Secondary structure																			.	.	.								S	S	T	T																														T	T													S	T	T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		241	.										.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence				.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		H	Y	.	.	.	.	.	.	.	.	.	N	N	P	S	F	G	Y	G	G	Y	C	L	P	K	D	T	K	Q	L	.	.	L	A	N	Y	Q	S	V	P	N	N	L	I	S	A	I	V	D	A	N	R	T	R	K	D
Query Conservation				.	.	.	.	.	.	.	.	.																				.	.
Alig confidence				.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		M	F	A	L	K	G	G	L	I	R	D	R	N	F	A	P	A	F	P	L	K	H	M	Q	K	D	L	R	L	A	V	A	L	G	D	R	V	G	Q	P	L	V	A	S	A	A	A	N	E	L	F	K	G	A	R	A
Template Known Secondary structure												T	T					S	S	B																			T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions