Job Description P76373 Confidence 99.89% Date Thu Jan 5 12:22:27 GMT 2012 Rank 33 Aligned Residues 254 % Identity 14% Template c3pduF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:3-hydroxyisobutyrate dehydrogenase family protein; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter sulfurreducens in complex with nadp+ Resolution 1.89 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I	A
Query Conservation																						.
Alig confidence																						.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	G	F	L	G	L	G	I	M	G	G	P	M	A	A	N	L	V	R	A	G	F	D	V	T	V	W	N	R	N	P	A	K	C	A	P	L	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	R	Q	A	S	S	P	A	E	V	C	A	A	C	D	I	T	I	A	M
Template Known Secondary structure									S	T	T											T	T								S	S	G	G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S	S									S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	.	.	S	P	E	F	L	R	E	G	K	A	L	Y	D	N	L	H	P	S	R	I
Query Conservation																																																												.	.
Alig confidence																			.	.	.	.	.	.																																				.	.																	.	.	.
Template Conservation																			.	.	.	.	.	.																																																						.	.	.
Template Sequence		L	A	D	P	A	A	A	R	E	V	C	F	G	A	N	G	V	.	.	.	.	.	.	L	E	G	I	G	G	G	R	G	Y	I	D	M	S	T	V	D	D	E	T	S	T	A	I	G	A	A	V	T	A	R	G	G	R	F	L	E	A	P	V	S	G	T	K	K	P	A	E	D	G	T	L	I	.	.	.	I
Template Known Secondary structure			S	S										S	T	T			.	.	.	.	.	.						T	T							S																	T	T																		T				.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.																																																						.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R	Q	I	I	E	G	V	C	L	D	P	R	I
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		L	A	A	G	D	Q	S	L	F	T	D	A	G	P	A	F	A	A	L	.	.	.	G	K	K	C	L	H	L	G	E	V	G	Q	G	A	R	M	K	L	V	V	N	M	I	M	G	Q	M	M	T	A	L	G	E	G	M	A	L	G	R	N	C	G	L	D	G	G	Q	L	L	E	V	L	D	A	G	A	M	A
Template Known Secondary structure													T								.	.	.								S	S	T	T																														T	T													S	T	T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		239	240	.	.	.										.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		G	N	H	Y	N	.	.	.	.	.	.	.	.	.	N	P	S	F	G	Y	G	G	Y	C	L	P	K	D	T	K	Q	L	.	.	L	A	N	Y	Q	S	V	P	N	N	L	I	S	A	I	V	D	A	N	R	T	R	K	D
Query Conservation							.	.	.	.	.	.	.	.	.																			.	.
Alig confidence							.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		N	P	M	F	K	G	K	G	Q	M	L	L	S	G	E	F	P	T	S	F	P	L	K	H	M	Q	K	D	L	R	L	A	V	E	L	G	D	R	L	G	Q	P	L	H	G	A	A	T	A	N	E	S	F	K	R	A	R	A
Template Known Secondary structure															T					S	S	B																			T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions