Job Description P76373 Confidence 98.71% Date Thu Jan 5 12:22:27 GMT 2012 Rank 129 Aligned Residues 151 % Identity 14% Template c3n7uD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I
Query Conservation																							.
Alig confidence																							.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	I	G	T	V	G	A	G	R	I	G	K	L	L	L	Q	R	L	K	P	F	G	C	N	L	L	Y	H	D	R	L	Q	M	A	P	E	L	E	K	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	K	F	V	E	D	L	N	E	M	L	P	K	C	D	V	I	V	I
Template Known Secondary structure										S											G	G	G									S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S	S					G	G	G		S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.				150
Predicted Secondary structure																																																												.	.	.	.	.	.													.	.	.
Query SS confidence																																																												.	.	.	.	.	.													.	.	.
Query Sequence		A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	.	.	.	.	.	.	F	S	P	E	F	L	R	E	G	K	A	L	.	.	.	Y
Query Conservation																																																												.	.	.	.	.	.													.	.	.
Alig confidence															.	.	.	.	.	.	.	.																																						.	.	.	.	.	.													.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		N	M	P	L	T	E	K	T	R	G	M	F	N	.	.	.	.	.	.	.	.	K	E	L	I	G	K	L	K	K	G	V	L	I	V	N	N	A	R	G	A	I	M	E	R	Q	A	V	V	D	A	V	E	S	G	H	I	G	G	Y	S	G	D	V	W	D	P	Q	P	A	P	K	D	H	P	W	R	Y	M	P
Template Known Secondary structure			S				T	T	T	T	T		B		.	.	.	.	.	.	.	.						T	S		T	T							S		G	G	G	B												T	S							S			S	S	S	S			T	T		G	G	G	T	S	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	L	H	P	S	R	I	V	I	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		N	Q	A	M	T	P	H	.	T	S	G	T	T	I	D	A	Q	L	R	Y	A	A	G	T	K	D	M	L
Template Known Secondary structure		T					S	S	.		G	G	G	S
Template Predicted Secondary structure									.
Template SS confidence
		326	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions