Job Description P76373 Confidence 96.93% Date Thu Jan 5 12:22:27 GMT 2012 Rank 334 Aligned Residues 70 % Identity 20% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.		.	.	.	.	.	.		.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																		.	.					.							.									.	.
Query SS confidence																		.	.					.							.									.	.
Query Sequence		K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	.	.	L	I	A	Q	.	N	H	E	V	V	A	.	L	D	I	L	P	S	R	V	.	.	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D
Query Conservation																		.	.					.							.									.	.
Alig confidence																		.	.					.							.									.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	M	L	V	G	C	G	N	I	G	R	A	L	L	H	Y	R	F	H	D	R	N	K	M	Q	I	S	M	A	F	D	L	D	S	N	D	L	V	G	K	T	T	E	D	G	I	P	V	Y	G	I	S	T	I	N	D	H	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	D	I	E
Template Known Secondary structure									S								T	S		G	G	G	T	S	S										T	T	S	T	T	T	T	S	B		T	T	S		B				G	G	G					T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																.	.	.	.	150
		76	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	I	I	A	T	P	T	D	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	I	L	T	V	P	S	T	E	A
Template Known Secondary structure							S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions