Job Description P76373 Confidence 99.37% Date Thu Jan 5 12:22:27 GMT 2012 Rank 74 Aligned Residues 196 % Identity 17% Template c3k6jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein f01g10.3, confirmed by transcript evidence; PDBTitle: crystal structure of the dehydrogenase part of multifuctional enzyme 12 from c.elegans Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																						.																	.	.	.	.	.	.	.
Query SS confidence																						.																	.	.	.	.	.	.	.
Query Sequence		K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	.	.	.	.	.	.	.	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D
Query Conservation																						.																	.	.	.	.	.	.	.
Alig confidence																						.																	.	.	.	.	.	.	.																			.	.	.	.									.
Template Conservation																																																																.	.	.	.									.
Template Sequence		S	V	A	I	I	G	G	G	T	M	G	K	A	M	A	I	C	F	G	L	A	G	I	E	T	F	L	V	V	R	N	E	Q	R	C	K	Q	E	L	E	V	M	Y	A	R	E	K	S	F	K	R	L	N	D	K	R	I	E	K	I	N	A	.	.	.	.	N	L	K	I	T	S	D	F	.	H	K	L	S	N
Template Known Secondary structure									S													T	T								S																			T	T	S											T	.	.	.	.	T					S		G	.	G	G		T	T
Template Predicted Secondary structure																																																																.	.	.	.									.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110		.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.										.																								.	.
Query SS confidence																																			.										.																								.	.
Query Sequence		A	D	Y	V	I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	.	I	N	P	Y	A	V	M	V	I	.	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	.	.	S	P	E	F	L	R	E	G	K	A	L
Query Conservation																																			.										.																								.	.
Alig confidence												.	.	.	.	.	.	.	.	.															.										.																								.	.											.
Template Conservation												.	.	.	.	.	.	.	.	.																																																													.
Template Sequence		C	D	L	I	V	E	S	V	I	E	.	.	.	.	.	.	.	.	.	D	M	K	L	K	K	E	L	F	A	N	L	E	N	I	C	K	S	T	C	I	F	G	T	N	T	S	S	L	D	L	N	E	I	S	S	V	L	R	D	P	S	N	L	V	G	I	H	F	F	N	P	A	N	V	I	R	L	V	E	.
Template Known Secondary structure			S								S	.	.	.	.	.	.	.	.	.														T	T	S		T	T								S	S	S							T	T	S	S	S	G	G	G								S	S	T	T	T						.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																																													.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.										.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure														.																																																.	.
Query SS confidence														.																																																.	.
Query Sequence		Y	D	N	L	H	P	S	R	I	V	I	G	.	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	.	.	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R
Query Conservation														.																																																.	.
Alig confidence		.	.	.	.	.	.	.	.					.																		.	.													.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation		.	.	.	.	.	.	.	.																							.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	I	Y	G	S	H	T	S	S	Q	A	I	A	T	A	F	Q	A	C	E	S	I	.	.	K	K	L	P	V	L	V	G	N	C	K	S	.	.	.	.	.	.	.	.	.	.	F	V	F	N	R	L	L	H	V	Y	F	D	Q	S	Q	K	L	M	Y	E	Y	G	Y	L	P	H
Template Known Secondary structure		.	.	.	.	.	.	.	.					S	S																T	.	.	T							S	S				.	.	.	.	.	.	.	.	.	.																				T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																							.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
										186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.											220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		227	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	I	E	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	D	K	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions