Return to main results Retrieve Phyre Job Id

Job DescriptionP76373
Confidence98.76%DateThu Jan 5 12:22:27 GMT 2012
Rank128Aligned Residues109
% Identity21%Templatec3gviB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of lactate/malate dehydrogenase from2 brucella melitensis in complex with adp
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20. .. ......30.........40.........50...... ...60.........70......
Predicted Secondary structure 



.

.











..









Query SS confidence 




















.

.
































. .



















Query Sequence  MKITISGTGYVGLSNGLLIAQ. NH. EVVALDILPSRVAMLNDRISPIVDKEIQQFLQS. . DKIHFNATLDKNEAYRDADY
Query Conservation 


 




 


 

  

 .
 . 
 
 
     
  
  
     
  
 
 
  ..    
  
         


Alig confidence 




















.

.
















........







..









.








Template Conservation   

 




 

   
  
    
 

 
 

          ........

            
    
. 


  


Template Sequence  NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGL. . . . . . . . DIAESSPVDGFDAKFTGAND. YAAIEGADV
Template Known Secondary structure 


STT


SSSS........T



SS.GGGGTT
S
Template Predicted Secondary structure 









........






.



Template SS confidence 















































































   4.....10.........20.........30.........40..... ....50.........60..... ....70....
 
   77..80.........90.........100.........110........
Predicted Secondary structure 




















Query SS confidence 









































Query Sequence  VIIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKST
Query Conservation 


 


             
      
  
  
 


  

Alig confidence 









































Template Conservation 


 

          
  
   
   
    
 
 


 

Template Sequence  VIVTAGVPRKDDLLGINLKVMEQVGAGIKKYAPEAFVICITN
Template Known Secondary structure 

S





TT


S
Template Predicted Secondary structure 












Template SS confidence 









































   75....80.........90.........100.........110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions