Job Description P76373 Confidence 97.89% Date Thu Jan 5 12:22:27 GMT 2012 Rank 258 Aligned Residues 112 % Identity 17% Template c3dapB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:diaminopimelic acid dehydrogenase; PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.		.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																						.		.							.
Query SS confidence																						.		.							.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	.	Q	.	N	H	E	V	V	A	.	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V
Query Conservation																						.		.							.
Alig confidence																						.		.							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	V	A	I	V	G	Y	G	N	L	G	R	S	V	E	K	L	I	A	K	Q	P	D	M	D	L	V	G	I	F	S	R	R	A	T	L	D	T	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	F	D	V	A	D	V	D	K	H	A	D	D	V	D	V	L
Template Known Secondary structure										S											T	T		S	S									S		S			S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	G	G	G	G	T	T	T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.																		.
Query SS confidence																																											.	.	.																		.
Query Sequence		I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	.	.	.	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	.	I	I	F	S	P	E	F	L	R	E	G
Query Conservation																																											.	.	.																		.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																		.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	C	M	G	S	A	T	D	I	P	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	K	F	A	Q	F	A	C	T	V	D	T	Y	D	N	H	R	D	I	P	R	H	R	Q	V	M	N	E	A	A	T	A	A	G	N	V	A	L	V	S	T	G	W	D	P	G
Template Known Secondary structure					S		T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	S									G	G	G																T						S		S	B	T	T	B
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.														.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions