Job Description P76373 Confidence 96.59% Date Thu Jan 5 12:22:27 GMT 2012 Rank 363 Aligned Residues 178 % Identity 17% Template c3aogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.												30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	.	.	.	.	.	.	.	.	.	.	.	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N
Query Conservation																							.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.									.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	V	A	I	Q	G	F	G	N	V	G	N	A	A	A	R	A	F	H	D	H	G	A	R	V	V	A	V	Q	D	H	T	G	T	V	Y	N	E	A	G	I	D	P	Y	D	L	L	R	H	V	Q	E	F	G	G	V	R	G	Y	P	.	.	.	.	.	.	.	.	.	.	K	A	E	P	L	P	A	A	D
Template Known Secondary structure										S													T	T									S	S						T	T														T	S	S	S	T	T		T	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280											.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	Y	R	D	A	D	Y	V	I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	S	P	E	F	L	R	E	G	K	A
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																							.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																							.	.	.	.
Template Sequence		F	W	G	L	P	V	E	F	L	V	P	A	A	L	E	K	Q	I	T	E	Q	N	A	W	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	R	I	V	A	E	G	A	N	G	P	.	T	T	P	A	A	D	D	I	L	L	E	K	G	V	L	V	V	P	D	V	I	A	.	.	.	.
Template Known Secondary structure			T	T				S						S	S	S	S		B		T	T	T	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S						S	S	S		.	B												T										.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																							.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.																.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	D	N	L	H	P	S	R	I	V	I	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R	Q	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	N	A	G	G	V	T	V	S	Y	F	E	W	V	Q	D	F	N	S	.	.	.	.	.	.	.	.	.	.	.	Y	F	W	T	E	E	E	I	N	A	R	L	E	R	V	L	R	N	A	.	.	.	.	F	E	A	V	W	Q	V	A	Q	E	K	K	I	P	L	R	T	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T														T	T	T	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.												T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
												350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.												.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.					.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		229	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	G	V	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	V	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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