Job Description P76373 Confidence 96.31% Date Thu Jan 5 12:22:27 GMT 2012 Rank 384 Aligned Residues 172 % Identity 16% Template c3aoeC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form) Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.														.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																							.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D
Query Conservation																							.								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.								.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	V	V	V	Q	G	L	G	Q	V	G	A	A	V	A	L	H	A	E	R	L	G	M	R	V	V	A	V	A	T	S	M	G	G	M	Y	A	P	E	G	L	D	V	A	E	V	L	S	A	Y	E	A	T	G	S	L	P	R	L	D	L	A	P	E	E	V	F	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S													T	T									T	T						T	T															S	S		S				B		G	G	G	S	T	T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	E	A	Y	R	D	A	D	Y	V	I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	S	P	E	F	L	R	E	G
Query Conservation
Alig confidence		.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																						.	.
Template Conservation		.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																						.	.
Template Sequence		.	.	.	.	.	L	E	A	E	V	L	V	L	A	A	R	E	G	A	L	D	G	D	R	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	Q	A	Q	A	V	V	E	V	A	N	F	G	L	.	N	P	E	A	E	A	Y	L	L	G	K	G	A	L	V	V	P	D	L	L	S	.	.
Template Known Secondary structure		.	.	.	.	.	S	S		S						S	S	S	S		B						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				S						S	T	T		B	.											T	T										.	.
Template Predicted Secondary structure		.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																						.	.
Template SS confidence
							288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.																.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	Y	D	N	L	H	P	S	R	I	V	I	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	L	L	A	S	Y	L	E	W	V	Q	D	L	N	M	F	F	W	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	V	R	E	R	F	E	T	R	V	A	R	V	V	D	A	V	C	R	R	A	E	R	G	G	L	D	L	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T																	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.																.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		227	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	I	E	G	V	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	A	L	A	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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