Job Description P76373 Confidence 95.24% Date Thu Jan 5 12:22:27 GMT 2012 Rank 473 Aligned Residues 172 % Identity 20% Template c2yfqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase from2 peptoniphilus asaccharolyticus Resolution 2.94 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.								.
Query SS confidence																							.								.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	.	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I
Query Conservation																							.								.
Alig confidence																							.								.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	I	A	V	Q	G	F	G	N	V	G	T	F	T	V	K	N	I	E	R	Q	G	G	K	V	C	A	I	A	E	W	D	R	N	E	G	N	Y	A	L	Y	N	E	N	G	I	D	F	K	E	L	L	A	Y	K	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	T	I	I	V
Template Known Secondary structure		S								S													T	T								B			S	S	S		S	B			B		S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	S	P	E	F	L	R	E	G	K	A	L	Y	D	N	L	H	P	S	R	I
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	A	L	E	N	V	I	T	G	E	R	A	K	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	K	L	V	C	E	A	A	N	G	P	T	.	T	P	E	G	D	K	V	L	T	E	R	G	I	N	L	T	P	D	I	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S		S	S		S						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S						S	S	S		S	.												T										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.																.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R	Q	I	I	E	G	V	C
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		N	S	G	G	V	L	V	S	Y	Y	E	W	V	Q	N	Q	Y	G	.	.	.	.	.	.	.	.	.	.	.	Y	Y	W	T	E	A	E	V	E	E	K	Q	E	A	D	M	M	K	A	.	.	.	.	I	K	G	V	F	A	V	A	D	E	Y	N	V	T	L	R	E	A	V	Y	M	Y	A
Template Known Secondary structure		T	T																T	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.											T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.												.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.					.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions