Return to main results Retrieve Phyre Job Id

Job DescriptionP76373
Confidence100.00%DateThu Jan 5 12:22:27 GMT 2012
Rank2Aligned Residues385
% Identity25%Templatec2q3eH_
PDB info PDB header:oxidoreductaseChain: H: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of human udp-glucose dehydrogenase complexed with nadh and2 udp-glucose
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20. . .......30.........40.........50...... ...60.........70......
Predicted Secondary structure 



.
..












.









Query SS confidence 




















.
. .

































.



















Query Sequence  MKITISGTGYVGLSNGLLIAQ. N. . HEVVALDILPSRVAMLNDRISPIVDKEIQQFLQS. DKIHFNATLDKNEAYRDADY
Query Conservation 


 




 


 

  

 .
..  
 
 
     
  
  
     
  
 
 
  .    
  
         


Alig confidence 




















.
..

































.



















Template Conservation 








 


  
  

  
    
 
 
    

  
  
  

 



  
        
  

   

   


Template Sequence  KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL
Template Known Secondary structure 


STT
TTS
S
TSSS
SS

TTBTTTS

S
Template Predicted Secondary structure 




























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   77..80......... 90.........100...... ...110.........120.........130... ......140....
Predicted Secondary structure 









....



.








.......







Query SS confidence 












. . . .
















.


























. . . . . . .










Query Sequence  VIIATPTDYDPKT. . . . NYFNTSSVESVIKDVVE. INPYAVMVIKSTVPVGFTAAMHKKYRT. . . . . . . ENIIFSPEFLR
Query Conservation 


 


      ....       
      
  .
  
 


  


 



  
      .......  
   

   
Alig confidence 












....
















.


























.......










Template Conservation 


 



            

  
      
        


  



 

   
   

       
  
   


  
Template Sequence  VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLA
Template Known Secondary structure 




B
SSSTTTTTSB



S
S


TTTT

TT






Template Predicted Secondary structure 





































Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   145....150.........160.... .....170.........180.........190.........200.........210.........220
Predicted Secondary structure 









....






Query SS confidence 



















. . . .























































Query Sequence  EGKALYDNLHPSRIVIGERS. . . . ERAERFAALLQEGAIKQNIPMLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAES
Query Conservation   
 
        


 
   ....         
           
      

  

  
      

  

   
 
 
Alig confidence 



















....


















.



































Template Conservation   
 
        


 
         
   
  

        .
       

  

  
      

  

 
 
 
 
Template Sequence  EGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREK. ILTTNTWSSELSKLAANAFLAQRISSINSISALCEA
Template Known Secondary structure  TTSS
S


SSTTTS
GGG.
Template Predicted Secondary structure 














.

Template SS confidence 















































































   165....170.........180.........190.........200....... ..210.........220.........230.........240...
 
   221........230.........240.........250.........260.........270. ........280.........290....
Predicted Secondary structure 





























....
..
Query SS confidence 


















































. . . .






















. .
Query Sequence  LGLNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNN. . . . LISAIVDANRTRKDFIADAILSR. .
Query Conservation   


   
        


     

 
 

 




   
          ....
       
      
       ..
Alig confidence 


















































....






















..
Template Conservation   


  

  
     


   
 

 
 

 




   
   
   
              
              
 
Template Sequence  TGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLF
Template Known Secondary structure  T

TSTTT
SSS



S


SSSTT
TT
Template Predicted Secondary structure 

































Template SS confidence 















































































   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   295....300.........310.........320.........330.........340...... ...350.........360.
Predicted Secondary structure  ...



















..........








Query SS confidence  . . .



















































. . . . . . . . . .














Query Sequence  . . . KPQVVGIYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVIIYEPVMKEDSFFN. . . . . . . . . . SRLERDLATFKQQAD
Query Conservation  ...    
 






    
 
 
    
   
   
  
   

         ..........             

Alig confidence  ...



















































..........














Template Conservation         
 






  
 
 
 


  

  
   
  
   

 
                          
   

Template Sequence  NTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHDQVSRLVTISKDPYEACDGAH
Template Known Secondary structure  T

TT


SSSSS



TT
TT

SSS




SSTT
S
Template Predicted Secondary structure 





































Template SS confidence 















































































   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   362.......370.... .....380......
Predicted Secondary structure 


.........









Query SS confidence 












. . . . . . . . .











Query Sequence  VIISNRMAEELKD. . . . . . . . . VADKVYTRDLFG
Query Conservation    

 
       .........
           
Alig confidence 












.........











Template Conservation   


 
 
 

       
   
     
 
 
 
Template Sequence  AVVICTEWDMFKELDYERIHKKMLKPAFIFDGRR
Template Known Secondary structure 
S

GGGGGS
S
SS
SSS
Template Predicted Secondary structure 













Template SS confidence 

































   410.........420.........430.........440...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions