Job Description P76373 Confidence 99.50% Date Thu Jan 5 12:22:27 GMT 2012 Rank 65 Aligned Residues 180 % Identity 16% Template c2pv7B_ PDB info PDB header:isomerase, oxidoreductase Chain: B: PDB Molecule:t-protein [includes: chorismate mutase (ec 5.4.99.5) (cm) PDBTitle: crystal structure of chorismate mutase / prephenate dehydrogenase2 (tyra) (1574749) from haemophilus influenzae rd at 2.00 a resolution Resolution 2.00 Å

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		2	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																.
Query SS confidence							.																.
Query Sequence		K	I	T	I	S	.	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I
Query Conservation							.																.
Alig confidence							.																.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	I	V	G	G	Y	G	K	L	G	G	L	F	A	R	Y	L	R	A	S	G	Y	P	I	S	I	L	D	R	E	D	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	S	I	L	A	N	A	D	V	V	I	V
Template Known Secondary structure							T	T	T	S													T	T								T	T		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G						T	T		S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																																.	.	.	140	.	.	.	.	.	.	.	.	.	150
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																													.																																						.
Query SS confidence																													.																																						.
Query Sequence		A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	.	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	S	P	E	F	L	.	R	E	G	K	A	L	Y	D	N	L	H	P	S	R
Query Conservation																													.																																						.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.													.																																						.												.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.																																																															.	.	.
Template Sequence		S	V	P	I	.	.	.	.	.	.	.	.	.	.	.	N	L	T	L	E	T	I	E	R	L	K	P	Y	L	T	E	N	X	L	L	A	D	L	T	S	V	K	R	E	P	L	A	K	X	L	E	V	H	T	G	A	V	L	G	L	H	P	X	F	G	A	D	I	A	S	X	A	K	Q	V	V	V	.	.	.
Template Known Secondary structure					G	.	.	.	.	.	.	.	.	.	.	.	G	G									G	G	G			T	T	S							S														S	S								S	S		T	T		S			T	T					.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																																																															.	.	.
Template SS confidence
		151	.	.	.												.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	I	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R	Q	I	I	E	G	V	C
Query Conservation
Alig confidence																						.	.	.																																			.	.	.	.
Template Conservation																						.	.	.																																			.	.	.	.
Template Sequence		R	C	D	G	R	F	P	E	R	Y	E	W	L	L	E	Q	I	Q	I	W	.	.	.	G	A	K	I	Y	Q	T	N	A	T	E	H	D	H	N	X	T	Y	I	Q	A	L	R	H	F	S	T	F	A	N	G	L	H	L	.	.	.	.	S	K	Q	P	I	N	L	A	N	L	L	A	L	S	S
Template Known Secondary structure								G	G	G	T										T	.	.	.	T																			T															.	.	.	.		T	S	S									T
Template Predicted Secondary structure																						.	.	.																																			.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions