Job Description P76373 Confidence 100.00% Date Thu Jan 5 12:22:27 GMT 2012 Rank 4 Aligned Residues 386 % Identity 25% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																							.			.	.																																		.
Query SS confidence																							.			.	.																																		.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	.	.	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	.	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y
Query Conservation																							.			.	.																																		.
Alig confidence																							.			.	.																																		.
Template Conservation
Template Sequence		S	K	V	V	C	V	G	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	C	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	W	N	S	D	K	L	P	I	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	R	N	L	F	F	S	S	D	I	P	K	A	I	A	E	A	D	L
Template Known Secondary structure		S								S	T	T													T	T	S							S									T	S	S	S		S	S			T	T	T						T	T	B	T	T	T					S										S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.																	.																												.	.	.	.	.
Query SS confidence																.	.	.	.																	.																												.	.	.	.	.
Query Sequence		V	I	I	A	T	P	T	D	Y	D	P	K	T	N	.	.	.	.	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	.	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	.	.	.	.	.	E	N	I	I	F	S	P	E	F	L	R	E	G
Query Conservation																.	.	.	.																	.																												.	.	.	.	.
Alig confidence																.	.	.	.																	.																												.	.	.	.	.
Template Conservation
Template Sequence		I	F	I	S	V	N	T	P	T	K	M	Y	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	E	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	E	A	Q	K	L	K	F	Q	V	L	S	N	P	E	F	L	A	E	G
Template Known Secondary structure										B		S	S	S	T	T	T	T	T	S	B		T													S			S								S				T	T											T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		K	A	L	Y	D	N	L	H	P	S	R	I	V	I	G	E	R	S	E	.	.	.	.	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																			.
Template Conservation																																											.
Template Sequence		T	A	M	K	D	L	A	N	P	D	R	V	L	I	G	G	E	S	S	P	E	G	L	Q	A	V	A	E	L	V	R	I	Y	E	N	W	V	P	R	N	R	.	I	I	T	T	N	T	W	S	S	E	L	S	K	L	V	A	N	A	F	L	A	Q	R	I	S	S	I	N	S	I	S	A	V	C	E	A	T	G
Template Known Secondary structure									S		S								S	S																T	T	S		G	G	G	.																																						T
Template Predicted Secondary structure																																											.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.																										.	.	.	.
Query SS confidence																																																	.	.	.	.																										.	.	.	.
Query Sequence		L	N	S	R	Q	I	I	E	G	V	C	L	D	P	R	I	G	N	H	Y	N	N	P	S	F	G	Y	G	G	Y	C	L	P	K	D	T	K	Q	L	L	A	N	Y	Q	S	V	P	.	.	.	.	N	N	L	I	S	A	I	V	D	A	N	R	T	R	K	D	F	I	A	D	A	I	L	S	R	.	.	.	.
Query Conservation																																																	.	.	.	.																										.	.	.	.
Alig confidence																																																	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		A	E	I	S	E	V	A	H	A	V	G	Y	D	T	R	I	G	S	K	F	L	Q	A	S	V	G	F	G	G	S	C	F	Q	K	D	V	L	S	L	V	Y	L	C	E	S	L	N	L	P	Q	V	A	D	Y	W	Q	G	V	I	N	I	N	N	W	Q	R	R	R	F	A	D	K	I	I	A	E	L	F	N	T
Template Known Secondary structure													T	S	T	T	T		S	T	T					S				S	S	S															T	T																														T	T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
			295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.															.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	K	P	Q	V	V	G	I	Y	R	L	I	M	K	S	G	S	D	N	F	R	A	S	S	I	Q	G	I	M	K	R	I	K	A	K	G	V	E	V	I	I	Y	E	P	V	M	K	E	D	S	F	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	L	E	R	D	L	A	T	F	K	Q	Q
Query Conservation		.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	D	K	K	I	A	I	F	G	F	A	F	K	K	N	T	G	D	T	R	E	S	S	A	I	H	V	I	K	H	L	M	E	E	H	A	K	L	S	V	Y	D	P	K	V	Q	K	S	Q	M	L	N	D	L	A	S	V	T	S	A	Q	D	V	E	R	L	I	T	V	E	S	D	P	Y	A	A	A	R	G
Template Known Secondary structure			T	T									S	S	S	S	S					T	T												T	T	T								S	S	S													S													S							T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.										.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	V	I	I	S	N	R	M	A	E	E	L	K	D	.	.	.	.	.	.	.	.	.	V	A	D	K	V	Y	T	R	D	L	F	G	S
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	A	I	V	V	L	T	E	W	D	E	F	V	E	L	N	Y	S	Q	I	H	N	D	M	Q	H	P	A	A	I	F	D	G	R	L	I
Template Known Secondary structure			S						S			G	G	G	T	T	S								T	S		S	S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.