Job Description P76373 Confidence 99.16% Date Thu Jan 5 12:22:27 GMT 2012 Rank 103 Aligned Residues 171 % Identity 19% Template c2i76B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I	A	T
Query Conservation																					.
Alig confidence																					.		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	F	V	G	T	G	T	L	T	R	F	F	L	E	C	L	K	I	G	Y	.	.	.	.	I	L	S	R	S	I	D	R	A	R	N	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	G	G	K	A	A	T	L	E	K	H	P	E	V	V	F	V	I	V
Template Known Secondary structure								S	T	T													.	.	.	.	B			S	S									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T					T	T											S
Template Predicted Secondary structure																							.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.																						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	S	P	E	F	L	R	E	G	K	A	L	Y	D	N	L	H	P	S	R	I	V	I	G
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.	.	.	.																										.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.	.	.	.																										.
Template Sequence		P	D	.	.	.	.	.	.	.	.	.	.	.	R	Y	I	K	T	V	A	N	H	L	N	.	.	L	G	D	A	V	L	V	H	C	S	G	F	L	S	S	E	I	F	K	.	.	.	.	.	K	S	G	R	A	S	I	H	P	N	F	S	F	L	E	K	A	L	E	X	K	D	Q	I	V	.	F	G	L	E
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.								T	T	T		.	.		S	S								S	S	S		S	T	T	T		.	.	.	.	.	S	S	S								S				T	T	G	G	G		G	G	G			.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.	.	.	.																										.
Template SS confidence
		65	.												.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	.	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N
Query Conservation																																	.
Alig confidence																		.	.	.													.												.	.	.	.
Template Conservation																		.	.	.																									.	.	.	.
Template Sequence		G	D	E	R	G	L	P	I	V	K	K	I	A	E	E	I	.	.	.	S	G	K	Y	F	V	I	E	K	K	K	A	Y	H	L	A	A	V	I	A	S	N	F	P	.	.	.	.	V	A	L	A	Y	L	S	K	R	I	Y	T	L	L	G	L	D
Template Known Secondary structure				T	T													.	.	.	S	S																				T			.	.	.	.														T	T		S
Template Predicted Secondary structure																		.	.	.																									.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions