Job Description P76373 Confidence 99.54% Date Thu Jan 5 12:22:27 GMT 2012 Rank 61 Aligned Residues 189 % Identity 12% Template c2g5cD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.			.	.
Query SS confidence																						.			.	.
Query Sequence		K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	.	.	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I
Query Conservation																						.			.	.
Alig confidence																						.			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	L	I	V	G	V	G	F	X	G	G	S	F	A	K	S	L	R	R	S	G	F	K	G	K	I	Y	G	Y	D	I	N	P	E	S	I	S	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	L	G	I	I	D	E	G	T	T	S	I	A	K	V	E	D	F	S	P	D	F	V	X
Template Known Secondary structure							S		S													T	T			S							S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S		S				S		G	G	G	G	G	G	G			S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																														.																																	.	.	.	.
Query SS confidence																														.																																	.	.	.	.
Query Sequence		I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	.	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	.	.	.	.	S	P	E	F	L	R	E	G	K	A	L	Y	D	N	L
Query Conservation																														.																																	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.													.																																	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	S	P	V	.	.	.	.	.	.	.	.	.	.	.	R	T	F	R	E	I	A	K	K	L	S	Y	I	L	S	E	D	A	T	V	T	D	Q	G	S	V	K	G	K	L	V	Y	D	L	E	N	I	L	G	K	R	F	V	G	G	H	P	I	A	G	T	E	K	S	G	V	E	Y	S	L	D	N	L	Y
Template Known Secondary structure				S		G	.	.	.	.	.	.	.	.	.	.	.	G	G												S		T	T								S			T											G	G	G											S			S	G	G	G			S	S	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.												.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		H	P	S	R	I	V	I	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	.	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		E	G	K	K	V	I	L	T	P	T	K	K	T	D	K	K	R	L	K	L	V	K	R	V	W	E	D	V	G	G	V	V	E	Y	X	S	P	E	L	H	D	Y	V	F	G	V	V	S	H	L	P	H	A	V	A	F	A	L	V	D	T	L	I	H
Template Known Secondary structure		T	T									T	T	S															T	T																			T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions