Job Description P76373 Confidence 96.61% Date Thu Jan 5 12:22:27 GMT 2012 Rank 358 Aligned Residues 114 % Identity 18% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure				.												.									.
Query SS confidence				.												.									.
Query Sequence		M	K	.	I	T	I	S	G	T	G	Y	V	G	L	.	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V
Query Conservation				.												.									.
Alig confidence				.												.									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		V	R	H	I	H	F	V	G	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	X	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	.	V	R	D	A	S	V	V
Template Known Secondary structure									T	T	T	S	T	T											T	T								S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T					S	S			G	G	G	.	G	T	T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.
		78	.	80	.	.	.	.	.	.								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		I	I	A	T	P	T	D	Y	D	.	.	.	.	.	.	.	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																							.	.	.
Template Conservation																																								.	.	.
Template Sequence		V	V	S	S	A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	X	R	F	R	H	.	.	.	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y	A
Template Known Secondary structure					T	T			T	T										T	T															T	T	S		.	.	.						S	S	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions