Job Description P76373 Confidence 98.43% Date Thu Jan 5 12:22:27 GMT 2012 Rank 174 Aligned Residues 146 % Identity 19% Template c2d0iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:dehydrogenase; PDBTitle: crystal structure ph0520 protein from pyrococcus horikoshii ot3 Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I
Query Conservation																							.
Alig confidence																							.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	V	G	I	L	G	M	G	A	I	G	K	A	I	A	R	R	L	I	P	F	G	V	K	L	Y	Y	W	S	R	H	R	K	V	N	V	E	K	E	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	Y	M	D	I	D	E	L	L	E	K	S	D	I	V	I	L
Template Known Secondary structure										S											G	G	G	T								T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.
Query Sequence		A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	.	.	.	.	.	.	I	F	S	P	E	F	L	R	E	G	K	A	L	Y	D	N	L
Query Conservation																																																											.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.									.																												.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.									.
Template Sequence		A	L	P	L	T	R	D	T	Y	H	I	I	N	.	.	.	.	.	.	.	.	E	E	R	V	K	K	L	E	.	G	K	Y	L	V	N	I	G	R	G	A	L	V	D	E	K	A	V	T	E	A	I	K	Q	G	K	L	K	G	Y	A	T	D	V	F	E	K	E	P	V	R	E	H	E	L	F	K	Y	E	W
Template Known Secondary structure							T	T	T	T	T	T	B		.	.	.	.	.	.	.	.							T	T	.	T							S		G	G	G	B											T	T		S	S					S			S	S	S	S		S			G	G	G	G		T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.									.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.									220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		154	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		H	P	S	R	I	V	I	.	.	.	.	.	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A
Query Conservation									.	.	.	.	.
Alig confidence			.	.	.				.	.	.	.	.
Template Conservation			.	.	.
Template Sequence		E	.	.	.	T	V	L	T	P	H	Y	A	G	L	A	L	E	A	Q	E	D	V	G	F	R	A	V	E	N	L
Template Known Secondary structure		T	.	.	.						S		T	T
Template Predicted Secondary structure			.	.	.
Template SS confidence
		278				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions