Job Description P76373 Confidence 99.20% Date Thu Jan 5 12:22:27 GMT 2012 Rank 97 Aligned Residues 201 % Identity 18% Template c1zcjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																						.																																				.	.	.	.
Query SS confidence																						.																																				.	.	.	.
Query Sequence		K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	.	.	.	.	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y
Query Conservation																						.																																				.	.	.	.
Alig confidence																						.																																				.	.	.	.													.
Template Conservation																																																																										.
Template Sequence		S	V	G	V	L	G	L	G	T	M	G	R	G	I	A	I	S	F	A	R	V	G	I	S	V	V	A	V	E	S	D	P	K	Q	L	D	A	A	K	K	I	I	T	F	T	L	E	K	E	A	S	R	A	H	Q	N	G	Q	A	S	A	K	P	K	L	R	F	S	S	S	T	K	.	E	L	S	T	V	D	L
Template Known Secondary structure									S												T	T	T								S	S																									T	T												S		G	G	.	G	G	T	T		S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																.								.																										.	.
Query SS confidence																																.								.																										.	.
Query Sequence		V	I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	.	I	N	P	Y	A	V	M	.	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	.	.	S	P	E	F	L	R	E	G	K	A	L	Y	D	N
Query Conservation																																.								.																										.	.
Alig confidence									.	.	.	.	.	.	.	.	.															.								.																										.	.											.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.																																																													.	.	.	.
Template Sequence		V	V	E	A	V	F	E	.	.	.	.	.	.	.	.	.	D	M	N	L	K	K	K	V	F	A	E	L	S	A	L	C	K	P	G	A	F	L	C	T	N	T	S	A	L	N	V	D	D	I	A	S	S	T	D	R	P	Q	L	V	I	G	T	H	F	F	S	P	A	H	V	M	R	L	L	E	.	.	.	.
Template Known Secondary structure								S	.	.	.	.	.	.	.	.	.																S		T	T								S	S	S							T	T	S	S		G	G	G								S	S	T	T	T						.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																																													.	.	.	.
Template SS confidence
		377	.	.	380	.	.	.										.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
		153	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	H	P	S	R	I	V	I	G	.	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R	Q	I	I	E	G
Query Conservation											.
Alig confidence		.	.	.	.	.					.																		.	.													.	.	.	.	.							.	.	.															.
Template Conservation		.	.	.	.	.																							.	.													.	.	.	.	.							.	.	.															.
Template Sequence		.	.	.	.	.	V	I	P	S	R	Y	S	S	P	T	T	I	A	T	V	M	S	L	S	K	K	I	.	.	G	K	I	G	V	V	V	G	N	C	Y	G	.	.	.	.	.	F	V	G	N	R	M	.	.	.	L	A	P	Y	Y	N	Q	G	F	F	L	L	E	E	.	G	S	K	P	E	D	V	D	G	V
Template Known Secondary structure		.	.	.	.	.					S	S																T	.	.	T						B			S	T	T	.	.	.	.	.	T	T					.	.	.														T	.	T
Template Predicted Secondary structure		.	.	.	.	.																							.	.													.	.	.	.	.							.	.	.															.
Template SS confidence
							444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.			.	.	.	.	470	.	.	.	.	.	.	.						.	.	480	.	.	.				.	.	.	.	.	.	490	.	.	.	.	.	.	.		.	.	500	.	.	.	.	.	.	.
		232
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		508

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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