Job Description P76373 Confidence 98.23% Date Thu Jan 5 12:22:27 GMT 2012 Rank 212 Aligned Residues 128 % Identity 19% Template c1qp8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase; PDBTitle: crystal structure of a putative formate dehydrogenase from2 pyrobaculum aerophilum Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I
Query Conservation																							.
Alig confidence																							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	V	A	V	L	G	L	G	E	I	G	T	R	V	G	K	I	L	A	A	L	G	A	Q	V	R	G	F	S	R	T	P	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	W	R	F	T	N	S	L	E	E	A	L	R	E	A	R	A	A	V	C
Template Known Secondary structure								S		S	T												T	T								S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S			B	S		S					T	T		S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																									160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.
Predicted Secondary structure																																																													.	.														.	.
Query SS confidence																																																													.	.														.	.
Query Sequence		A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	.	.	S	P	E	F	L	R	E	G	K	A	L	Y	D	.	.	N	L	H	P
Query Conservation																																																													.	.														.	.
Alig confidence															.	.	.	.	.	.	.	.																																							.	.														.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		A	L	P	L	N	K	H	T	R	G	L	V	K	.	.	.	.	.	.	.	.	Y	Q	H	L	A	L	X	A	E	D	A	V	F	V	N	V	G	R	A	E	V	L	D	R	D	G	V	L	R	I	L	K	E	R	P	Q	F	I	F	A	S	D	V	W	W	G	R	N	D	F	A	K	D	A	E	F	F	S	L
Template Known Secondary structure						S	T	T	T	T	T		B		.	.	.	.	.	.	.	.					T	T	S		T	T							S		G	G	G	B													T	T						S			T	T	T	T			G	G	G					T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.									.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		156	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	I	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	N	V	V	A
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions