Job Description P76373 Confidence 98.14% Date Thu Jan 5 12:22:27 GMT 2012 Rank 224 Aligned Residues 140 % Identity 16% Template c1mldA_ PDB info PDB header:oxidoreductase(nad(a)-choh(d)) Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: refined structure of mitochondrial malate dehydrogenase2 from porcine heart and the consensus structure for3 dicarboxylic acid oxidoreductases Resolution 1.83 Å

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		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure								.															.			.	.															.	.
Query SS confidence								.															.			.	.															.	.
Query Sequence		K	I	T	I	S	G	.	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	.	.	E	V	V	A	L	D	I	L	P	S	R	V	A	M	.	.	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D
Query Conservation								.															.			.	.															.	.
Alig confidence								.															.			.	.															.	.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	P	L	V	S	R	L	T	L	Y	D	I	A	H	T	P	G	V	A	A	D	L	S	H	I	E	T	R	A	.	.	.	.	.	.	.	.	.	.	.	T	V	K	G	Y	L	G	P	E	Q	L	P	D	C	L	K	G	C	D
Template Known Secondary structure							T	T	T	S	T	T										T		T	T		S							S	S	S									T	T	S	S	S	S		.	.	.	.	.	.	.	.	.	.	.							S	G	G	G						T	T		S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.												.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		Y	V	I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	.	.	.	.	.	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	S	P	E	F	L	R	E	G	K	A	L	Y
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																							.
Template Conservation																																																.
Template Sequence		V	V	V	I	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	N	T	N	A	T	I	V	A	T	L	T	A	A	C	A	Q	H	C	P	D	A	M	I	C	I	I	.	S	N	P	V	N	S	T	I	P	I	T	A	E	V	F	K	K	H	G	V	Y	N	P	N	K	I	F	G	V	T	T	L	D
Template Known Secondary structure								S					T	T			G	G	G	G																				T	T	S						.	S	S																T	T				T	T	S
Template Predicted Secondary structure																																																.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		151	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions