Job Description P76373 Confidence 98.22% Date Thu Jan 5 12:22:27 GMT 2012 Rank 213 Aligned Residues 106 % Identity 19% Template c1llcA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure determination of the allosteric l-lactate dehydrogenase from2 lactobacillus casei at 3.0 angstroms resolution Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																							.			.	.																																		.	.
Query SS confidence																							.			.	.																																		.	.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	.	.	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	.	.	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D
Query Conservation																							.			.	.																																		.	.
Alig confidence																							.			.	.																.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	V	I	L	V	G	D	G	A	V	G	S	S	Y	A	F	A	M	V	L	Q	G	I	A	Q	E	I	G	I	V	D	I	F	K	D	K	T	K	G	D	.	.	.	.	.	.	.	.	.	.	.	A	I	D	L	S	N	A	L	P	F	T	S	P	K	K	I	Y	S	A	E	Y	S	D	A	K	D	A	D
Template Known Secondary structure							S		T	T														T			S	S						S		S							.	.	.	.	.	.	.	.	.	.	.					T	T	S		T	T	S					B				T	T	T	T	T	S	S		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		Y	V	I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	.	.	.	.	.	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		L	V	V	I	T	A	G	A	P	K	Q	P	G	E	T	R	L	D	L	V	N	K	N	L	K	I	L	K	S	I	V	D	P	I	V	D	S	G	F	N	L	I	F	L	V	A	A
Template Known Secondary structure						B	T				S	S		S	S	S		S	T					T	T	S	T	T	T	T	T	T						T	T			S					B
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions